Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele45g0462 | ATGCCGGTGAATCTCACGCCCAACGCGATCCCGGCGATTGTCGCCGGCGACGTGAACTCGAAGCCGCTCGTCCAGGTCCTCGACATCAAGTTGCTTTCTAATTCGCAGCAGGAGAGGTACCGACTTCTGCTTTCCGATTCCGCTTCCACTCAGCACGCTATGCTCGCGACTCAGCTGAACGACCGAGTTAGAACCGGACGAGTCAAGAAAGGTTCCGTCGTTCAGCTGATTGAGTACATTTGCAGTCAAATTCAGAACCGCAAGATCATTGTAGTGCTCAACATGGAAACTATAATTCCAGATTGTGAGATTATCGGGCATCCAAACTCATTCCTGGAATCTGATTTAACAGCTCAGAAAGCATTGCCTAATAACAATATGCAGAACTCATCCAGGCTTAATAATCGTCTGTCTGCTCAAAATTCAAGTCATGATGAGCAGAATTTCAGGCCAACTGTTCAACCTCCATTCCGACCACCACCAGTTTACAAAGGCCATGGTGCTATTATGAAGAATGATGCACCTGCACGGATCATTCCTATTGCTGCTTTAAATCCTTATCAAGGCCGGTGGGCCATTAAGGCAAGAGTAACTGCAAAAGGGGATCTCCGCCGCTATAATAATGCTCGAGGAGATGGAAAAGTTTTCTCTTTTGATCTCCTTGACTCTGATGGAGGTGAAATACGAGTAACTTGCTTCAATGCTGTTGTTGACCGATTTTATGATGTAATTGAGGTTGGTAGAGTTTACTTGATATCCAAAGGTGGCTTAAAACCTGCACAAAAGAACTTCAATCATTTGAAGAATGACTGGGAAATTATCCTGGACTCTAATTCATCTGTGGAGCTATGCCCAGATGAAGATGCTTCAATACCCAGACAGCAATTCTCCTTTAGGCCTATCAGTGACATTGAGAATGCCGAAAGCAACTGCATTCTTGATGTTATTGGGGTTGTGACATCTGTAAATCCCTCTGTTCCCATCTTGAGGAAGAATGGTATGGAAACTCAAAGGCGAATTCTGAATGTAAAGGACATGTCTGGCAGGAGTGTTGAGCTAACCCTTTGGGGTGATTTCTGCAATAGGGAAGGTCAAAAGCTTCAAGAGATGGTTGATGGTGGGTTTTTCCCAGTTCTGGCAATAAAATCTGGGAGGGTTAATGACTTTAGTGGAAAATCTATAGGAACCATTTCTTCTACCCAACTCTTCATTAACCCAGATTTTCCTGAAGCTCATAGATTAAGAGACTGGTTTGATCAAGGGGGGAAAGATTCAGCTTCTTTGTCCATTTCCAAAGACATTACGCCTGGAGGACCTAAGAATGAGATACGTAAAACTGTGTCTCAGATCAAAGATGAAGGCCTGGGGCGATCAGATAAGCCAGATTGGATAACGGTGAGGGCAACCATATCTTTCATCAAGACGGATACATTTTGTTACACAGCTTGCCCATTGATGATCGGAGACCGACAGTGCAGTAAAAAAGTGACTAGGTCAGGAAGCACTAAGTGGCAATGCGATAGATGCGATCAAGAGTTTGAGGAGTGTGATTACCGTTACCTTCTCCAAGCCCAAATTCTGGATCATACGGGAATAACTTGGGTCACAGCATTCCAAGAATCAGGAGAGGAAATCTTAGGTTGCTCAGCAAAGGATCTGTACTTATTGAAGTATGAAGAACAGGATGATGATAAGTTTGGGATCATGATCCGTAGTAAACTCTTCAACCAGTTTGTGTTTCGGCTCAAAGTTAAGGAAGAATTGTATGGTGATGAACAGAGAGTGAAGATTACAGTGGTTAAGGCAGATAAAGTGGATTACCCTTCAGAGAATAGATACATGCTAGATTTGATTTCAAAATTTTGTAAGCAGTAA | 1875 | 0.4341 | MPVNLTPNAIPAIVAGDVNSKPLVQVLDIKLLSNSQQERYRLLLSDSASTQHAMLATQLNDRVRTGRVKKGSVVQLIEYICSQIQNRKIIVVLNMETIIPDCEIIGHPNSFLESDLTAQKALPNNNMQNSSRLNNRLSAQNSSHDEQNFRPTVQPPFRPPPVYKGHGAIMKNDAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYDVIEVGRVYLISKGGLKPAQKNFNHLKNDWEIILDSNSSVELCPDEDASIPRQQFSFRPISDIENAESNCILDVIGVVTSVNPSVPILRKNGMETQRRILNVKDMSGRSVELTLWGDFCNREGQKLQEMVDGGFFPVLAIKSGRVNDFSGKSIGTISSTQLFINPDFPEAHRLRDWFDQGGKDSASLSISKDITPGGPKNEIRKTVSQIKDEGLGRSDKPDWITVRATISFIKTDTFCYTACPLMIGDRQCSKKVTRSGSTKWQCDRCDQEFEECDYRYLLQAQILDHTGITWVTAFQESGEEILGCSAKDLYLLKYEEQDDDKFGIMIRSKLFNQFVFRLKVKEELYGDEQRVKITVVKADKVDYPSENRYMLDLISKFCKQ | 624 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele45g0462 | 624 | Pfam | Replication factor-A protein 1, N-terminal domain | 5 | 98 | IPR007199 | GO:0003677|GO:0005634|GO:0006260 | |
Lele45g0462 | 624 | Gene3D | - | 289 | 429 | IPR012340 | - | |
Lele45g0462 | 624 | SUPERFAMILY | Nucleic acid-binding proteins | 444 | 621 | IPR012340 | - | |
Lele45g0462 | 624 | Gene3D | - | 3 | 111 | IPR012340 | - | |
Lele45g0462 | 624 | CDD | RPA1_DBD_A | 180 | 283 | - | - | |
Lele45g0462 | 624 | SUPERFAMILY | Nucleic acid-binding proteins | 295 | 423 | IPR012340 | - | |
Lele45g0462 | 624 | FunFam | Replication protein A subunit | 290 | 428 | - | - | |
Lele45g0462 | 624 | Pfam | OB-fold nucleic acid binding domain | 192 | 265 | IPR004365 | GO:0003676 | |
Lele45g0462 | 624 | TIGRFAM | rpa1: replication factor-a protein 1 (rpa1) | 5 | 620 | IPR004591 | GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310 | |
Lele45g0462 | 624 | CDD | RPA1_DBD_C | 447 | 620 | IPR013955 | - | |
Lele45g0462 | 624 | Pfam | Replication factor-A C terminal domain | 463 | 613 | IPR013955 | - | |
Lele45g0462 | 624 | Gene3D | - | 177 | 287 | IPR012340 | - | |
Lele45g0462 | 624 | MobiDBLite | consensus disorder prediction | 137 | 157 | - | - | |
Lele45g0462 | 624 | PANTHER | REPLICATION FACTOR A 1, RFA1 | 191 | 597 | IPR004591 | GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310 | |
Lele45g0462 | 624 | SUPERFAMILY | Nucleic acid-binding proteins | 1 | 106 | IPR012340 | - | |
Lele45g0462 | 624 | SUPERFAMILY | Nucleic acid-binding proteins | 177 | 291 | IPR012340 | - | |
Lele45g0462 | 624 | FunFam | Replication protein A subunit | 4 | 111 | - | - | |
Lele45g0462 | 624 | CDD | RPA1_DBD_B | 312 | 419 | - | - | |
Lele45g0462 | 624 | FunFam | Replication protein A subunit | 429 | 621 | - | - | |
Lele45g0462 | 624 | FunFam | Replication protein A subunit | 177 | 286 | - | - | |
Lele45g0462 | 624 | CDD | RPA1N | 9 | 99 | IPR007199 | GO:0003677|GO:0005634|GO:0006260 | |
Lele45g0462 | 624 | Gene3D | - | 431 | 622 | IPR012340 | - | |
Lele45g0462 | 624 | Pfam | Replication protein A OB domain | 301 | 405 | IPR031657 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele45g0462 | Lele-ChrLele45 | 3589943 | 3592684 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele45g0462 | 26 | 620 | Core DNA Replication Machinery Family | AT2G06510 | 70.244 | 0.0 | 912 |