Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0436 ATGATTTCAGGGCGGTGTGCAGCTTGTAAGAATCAAAGAAGAAAGTGTCCTTCAGATTGCATTTTCTCTCCCTATTTTCCTCCCAATGATCCTGAAAGATTCGCTTGTGTTCATAGAATATATGGTAGCAGCAATGTTGGAAAAATGCTTCAGCGAATTCCAGTGCAAATGAGGGCACAAGCAGTTCATACATTATATTTTGAAGCAAGATGCAGAATAGAAGATCCAGTGTATGGTTGTGTTAAGCTTATTTCTCAGTTGCATCAGAAATTGCATGATACAGAAAGTGAACTAGCCAAAGTTCAAGCTCTTGTTGCATTCCACAAGCTCCAAATCTCTGAAGTTGAACTTCATCAACCCAACTTGGACGCATCACAAAGCAACATGGAGCAGTTTCAGTTCAATTATTCTGCTCAGAATCCAACTTGGTTTATTAATTAG 441 0.39 MISGRCAACKNQRRKCPSDCIFSPYFPPNDPERFACVHRIYGSSNVGKMLQRIPVQMRAQAVHTLYFEARCRIEDPVYGCVKLISQLHQKLHDTESELAKVQALVAFHKLQISEVELHQPNLDASQSNMEQFQFNYSAQNPTWFIN 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0436 146 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
Lele45g0436 146 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
Lele45g0436 146 Coils Coil 84 104 - -
Lele45g0436 146 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0436 Lele-ChrLele45 3416047 3416674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0436 1 116 AS2 family AT3G26660 58.621 8.77e-51 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele45g0436 LOB 1.2e-36 No_clan