Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0435 ATGGCAAACAACTTAACGGGGCGGCTCTTGGGCTCAGAGATACATGGATTTCATACAATGCAGGGTGATGGCAGAGCTGAAATTTTGGTGCTTGAATTCTTTGGCCAACGTAGCTTGCTCGGTTTTAGAGTTTAGTTGGATGTTGCAATTATTATGGAGGAAGCAAGAAGCAGATGGCTTCGTCCCAATGAGATTCATGCCATACTCTGCAATTACAAAAATTTTACCATCCACGTCAAGCCAGTGACTTCGCCCAAAAGTGGTACTATTGTATTATTCGACAGGAAGAAGCTTAGGAACTTTCGTAAAGATGGGCACAATTGGAAAAAGAAAAAGGATGGGAAAACTGTTAAAGAAGCTCATGAGCACTTAAAAGTTGGTAATGAAGAAAGGATCCATGTATACTATGCACATGGTGAAGAAAACCAAAACTTTGTCCGCAGATGTTATTGGTTGCTTGATAAGAGTCTGGAGCATATTGTCCTTGTTCATTATCGTGAAACACAGGAGTCACGAGGTTCTCCAGCCGCACCTGTATATTCAAATGCTAGTTCTCCCTCTGATCTAACAACACCATGGATATTATCAGAAGAATTAGATTCTGGGATCAACAAGGCATACGCTGGTGAGCTGAATGACAATTTAACTGTCAAAAGTCATGAACTACGGCTGCATGAGATTAATACACTTGAATGGGATGACCTAGTGGTTACAAATGATCTTAACACCTCTACTACTTCCATTCCTACTAGAGGAACGGTTCCTTGTTTTCACCAAGAAAAACAAATTTTACTGAATGGAAATTTGAGCAAGGTAGTCAACAATCAATCTGCAGAGATTCATTCTTTTGATATTCTGAACAATTCAATTGATGGGAACAATAGTGCTCAATACAACTTTCCTGAAAGTTTGAATCTTCAGACAGCCAACAGTCAATTAAATTCAAATGTACAGAGTGAACATTCTATCACCATGGGTGATGGCAATTTTGGGGACAATATTATCAATGACACTCTGCAAAGCCAGGACAGCTTTGGAAAATGGATAAGCCATATGATAGCTGATTCACCATGTTCTATTGATGACTCAGGTCTTGAATCCTCAGTTTCATCAGTTCATGATTCATACTCTTCAGGATTGGATAATCATCAACCTTCTCTGCCAGAACAAGTATTTAATATCACTGATGTGTCTCCTGTCTGGGCATGCTCCACTGAGAAAACAAAGGTCCTAATAACTGGATTTTTTCATGATGACTATATGCACCTTGCGAAGTCCAATCTGTTTTGTATCTGTGGGGATGTACCTGTTCCTGCAGAGACTGTTCAAGTTGGGATCTACCGATGCTGGGTACCACCACATTCCCCTGGTTTTGTGAATCTCTATATGAGTATTGATGGCCACGAGCCCATAAGTCCAGTTGTGAATTTTGAGTATCGTACTACTGTTTTGCAAGACCCTGCTGCTTCCATAGAAGAGAGGCACAACTGGGAGGAGTTTCGACTTCAGATGAGGCTTGCACATTTGCTCTTTGCTACACAAAACGGTCTTGACATTACCTCTAGCAAAGTATCGCTTGATGCACTGGAGGAGGCTAAGAAATTTGTCTCCAAGACATCTTATATTTCCAAAAGTTGGCAATACTTGATTAAGTCTACTGAAGATAACAAAACTCCATTTCCACAAGCAAAAGATGCCTTGTTTGAAATTGCATTGAAGACTAAACTAAAGGAATGGCTGTTGGAGAGAATTATTTTAGGTTGTCAGACTACTGAACTGGATGCCCAAGGTCAAGGTGTAATCCATTTGTGCTCCATTTTGGGATATACATGGGCTGTTTCATTATTTTCATGGTCTGGTTTTTCATTGAATTTCCGTGATAAATTTGGATGGACAGCCCTGCACTGGGCAGCTTATTATGGAAGGGAGAAAATGGTTGCCGCTCTACTGTCTGCAAGGGCAAGGCCAAATTTGGTCACGGATCCTACTCCTCAACATCCTGGTGGAATTACTGCTGCTGATCTGGCTCAGATGAAGGGTTATAATGGCTTAGCAGCTTATCTTTCGGAAAAATCTCTGGTTGAGCAGTTCAACGAGATGAGCATAGCAGGAAATATCAGTGGCTCGCTGGAAACTACTAGCACAAGTGATCCAGTAAATTCTGAGAAGCTCAACGAGGATCAGCTGTACATGAAAGATACATTAGCAGCTTACAGGACAACTGCTGAGGCTGCAGCACGCATACAAGCTGCATTTAGGGAGCACTCACTAAAATTACGATCTCATGCAGTTGAACTTTTCAGTCCAGAGGCTGAAGCACGCCAAATAGTTGCAGCAATGAAGATCCAGCATGCTTTTCGAAACTTTGAGTCAAGGAAGTCTATGGCAGCTGCTGCTCGCATCCAGCATACCTTCCGTATGTGGAAGATGCGTAGAGAATTTCTCAATATGCGCCGCCAGGCAATCAAAATTCAGGCTGCTTTCCGGGCCCTCAAGGAGCGGAAGAACTACCGCAAAATCATCTGGTCTGTTGGTGTGGTTGAGAAAGCAATCCTGCGGTGGCGTTTAAAGAGAAAGGGCTTCCGTGGCCTACATGTAAATCCTGTCCAAGAAATGGTAGGTCAGAAGGAGGAAACAGAGTTTGTTACAGAGGAAGACTTTTTCCGTACTGGCCGGAAACAAGCCGAAGAACGTGTTGAGAGAGCTGTAGTACGTGTTCAAGCTATGTTCCGCTCTAAGAAAGCACAAGTAGATTACAGGATGATGAAACTAGCCCATAATGAAGCAAAGCTGGAACTAGAATATGAAGACCTCCTCAATTCAGAGGTTGATATGGGAGTGAAGACATAG 2850 0.4228 MANNLTGRLLGSEIHGFHTMQGDGRAEILVLEFFGQRSLLGFRVXLDVAIIMEEARSRWLRPNEIHAILCNYKNFTIHVKPVTSPKSGTIVLFDRKKLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEENQNFVRRCYWLLDKSLEHIVLVHYRETQESRGSPAAPVYSNASSPSDLTTPWILSEELDSGINKAYAGELNDNLTVKSHELRLHEINTLEWDDLVVTNDLNTSTTSIPTRGTVPCFHQEKQILLNGNLSKVVNNQSAEIHSFDILNNSIDGNNSAQYNFPESLNLQTANSQLNSNVQSEHSITMGDGNFGDNIINDTLQSQDSFGKWISHMIADSPCSIDDSGLESSVSSVHDSYSSGLDNHQPSLPEQVFNITDVSPVWACSTEKTKVLITGFFHDDYMHLAKSNLFCICGDVPVPAETVQVGIYRCWVPPHSPGFVNLYMSIDGHEPISPVVNFEYRTTVLQDPAASIEERHNWEEFRLQMRLAHLLFATQNGLDITSSKVSLDALEEAKKFVSKTSYISKSWQYLIKSTEDNKTPFPQAKDALFEIALKTKLKEWLLERIILGCQTTELDAQGQGVIHLCSILGYTWAVSLFSWSGFSLNFRDKFGWTALHWAAYYGREKMVAALLSARARPNLVTDPTPQHPGGITAADLAQMKGYNGLAAYLSEKSLVEQFNEMSIAGNISGSLETTSTSDPVNSEKLNEDQLYMKDTLAAYRTTAEAAARIQAAFREHSLKLRSHAVELFSPEAEARQIVAAMKIQHAFRNFESRKSMAAAARIQHTFRMWKMRREFLNMRRQAIKIQAAFRALKERKNYRKIIWSVGVVEKAILRWRLKRKGFRGLHVNPVQEMVGQKEETEFVTEEDFFRTGRKQAEERVERAVVRVQAMFRSKKAQVDYRMMKLAHNEAKLELEYEDLLNSEVDMGVKT 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0435 949 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 741 844 IPR027417 -
Lele45g0435 949 SMART iq_5 797 815 IPR000048 GO:0005515
Lele45g0435 949 SMART iq_5 898 920 IPR000048 GO:0005515
Lele45g0435 949 SMART iq_5 816 838 IPR000048 GO:0005515
Lele45g0435 949 SMART iq_5 774 796 IPR000048 GO:0005515
Lele45g0435 949 ProSiteProfiles Ankyrin repeat profile. 629 661 IPR002110 GO:0005515
Lele45g0435 949 ProSiteProfiles IQ motif profile. 794 823 IPR000048 GO:0005515
Lele45g0435 949 Pfam IQ calmodulin-binding motif 819 838 IPR000048 GO:0005515
Lele45g0435 949 Gene3D Immunoglobulins 388 483 IPR013783 -
Lele45g0435 949 ProSiteProfiles CG-1 DNA-binding domain profile. 48 174 IPR005559 GO:0003677
Lele45g0435 949 Gene3D - 794 841 - -
Lele45g0435 949 ProSiteProfiles IQ motif profile. 817 841 IPR000048 GO:0005515
Lele45g0435 949 SUPERFAMILY Ankyrin repeat 577 690 IPR036770 -
Lele45g0435 949 ProSiteProfiles IQ motif profile. 775 804 IPR000048 GO:0005515
Lele45g0435 949 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 47 927 - -
Lele45g0435 949 SMART ANK_2a 629 658 IPR002110 GO:0005515
Lele45g0435 949 ProSiteProfiles IQ motif profile. 900 928 IPR000048 GO:0005515
Lele45g0435 949 SMART CG_1_2 51 169 IPR005559 GO:0003677
Lele45g0435 949 FunFam calmodulin-binding transcription activator 5 559 699 - -
Lele45g0435 949 SUPERFAMILY E set domains 393 480 IPR014756 -
Lele45g0435 949 Gene3D - 557 697 IPR036770 -
Lele45g0435 949 ProSiteProfiles Ankyrin repeat region circular profile. 629 657 - -
Lele45g0435 949 FunFam Calmodulin-binding transcription activator 5 388 484 - -
Lele45g0435 949 Pfam CG-1 domain 54 167 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0435 Lele-ChrLele45 3406030 3414918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0435 51 932 CAMTA Transcription Factor Family AT3G16940 55.242 0.0 929
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Lele45g0435 CG-1 1.1e-46 No_clan