Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0428 ATGGTAAGAGCACCGTGCTGCGAGAAAGTGGGATTGAAGAAAGGAAGATGGACTGCTGAAGAAGATAAGATATTGACCGAGTACATCGAACAACATGGGGAAGGCGCCTGGAGGAACTTGCCCATGAATGCTGGATTGTTGAGGTGTGGGAAGAGTTGCAGACTGAGATGGATAAACTACTTGAGGGCAGACGTGAAGAGAGGAAACATAACGGCTGAAGAAGAAGAAATCATCGTCAAGTTGCATGCTGCTCTCGGCAACAGGTGGTCTGTGATAGCTGGACATTTACCAGGACGAACAGATAATGAAATAAAGAATTACTGGAACTCTCATTTAAGGAGAAAAATTTACTGCTTCATCAAAACCCTAAATGAATCCCTACCTTCTGTAAATGACATTGCTGCTTCCTCGAAACAAAGAGGTGGTCGGGCCAGGCCCACTCAAGCCACCATCAAGCCCAATAACCTGACTCCTTCGGCCCAAAATCTCCACTCACACAGTAACGCAGGCAAGGTGTTCGAGAAAATGTCCAAACCAATCCCAAACCCACAAACTTGTGCCAATAATGCAGGACCTGGAGATGTTGCCATAACGGCATCTTTATATAATAGTGATGATATTCTTGAGACCATGGGACCATATCAGTGGCTAGACTGTGAGATAAAGGAGCTTAGTTACATGTTGGAAAATGGAATGTTTATGAACCCAAATGAGAATTATGAGGAACCAGAAAATGAATTAATGCTGAGCAAAAATAATGACATGGAGGGTGGAGATTTGTATGAACTTGTGGGAAAGCAAATAATGGGAGCCAGTGATGAGGATGTTATGAGCAGAAACAGTAACGTTAATTCGTCAGAGATTTCTGTCTATGATTATCAGTGGCTTGACTGGGATTACAATCAACAATATCTCTGTGAAGAAGAGAGCCTGAATGCGAACTATTTGTGGGGGGATGGAAATGGTAGTGGAGAATTTGGGGGAAGTTTGTGTTCATATTGA 1002 0.4311 MVRAPCCEKVGLKKGRWTAEEDKILTEYIEQHGEGAWRNLPMNAGLLRCGKSCRLRWINYLRADVKRGNITAEEEEIIVKLHAALGNRWSVIAGHLPGRTDNEIKNYWNSHLRRKIYCFIKTLNESLPSVNDIAASSKQRGGRARPTQATIKPNNLTPSAQNLHSHSNAGKVFEKMSKPIPNPQTCANNAGPGDVAITASLYNSDDILETMGPYQWLDCEIKELSYMLENGMFMNPNENYEEPENELMLSKNNDMEGGDLYELVGKQIMGASDEDVMSRNSNVNSSEISVYDYQWLDWDYNQQYLCEEESLNANYLWGDGNGSGEFGGSLCSY 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0428 333 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele45g0428 333 FunFam Myb transcription factor 71 116 - -
Lele45g0428 333 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele45g0428 333 MobiDBLite consensus disorder prediction 136 162 - -
Lele45g0428 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele45g0428 333 Gene3D - 71 116 - -
Lele45g0428 333 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 174 - -
Lele45g0428 333 CDD SANT 71 112 IPR001005 -
Lele45g0428 333 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele45g0428 333 FunFam Myb transcription factor 11 67 - -
Lele45g0428 333 Gene3D - 13 66 - -
Lele45g0428 333 CDD SANT 16 61 IPR001005 -
Lele45g0428 333 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele45g0428 333 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lele45g0428 333 SMART sant 66 114 IPR001005 -
Lele45g0428 333 SMART sant 13 63 IPR001005 -
Lele45g0428 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0428 Lele-ChrLele45 3351911 3354320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0428 1 224 MYB Transcription Factor Family AT5G49330 52.193 3.35e-72 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele45g0428 Myb_DNA-binding 2e-12 CL0123