Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0427 ATGTTGATCATTTCAGTTTTGTTTTCAACTAGGAGTACAAGACCAGGAGGGTGGCGGCTACGTTGATCGCTTTCTTCTTCTCCTTCAGCTTCATGCTGTGTCTGTGTTGGATCATCAAGGGCCTCCTTCAATAGGAAATTCCCATTGCCTCTTTCTCATTTTCTTATTCTGTGTTCTGTTCAGATCTTCGAAATAATGGTCGATCTGAGTGGAAAGGGATCGGAGGCAGAGGACCCCAATAACAGAAACCCTAACAGCGATTCATCGGACAAAAGCCCAATGAGCAACGAGCAGAAGAAAACCTGCGCCGACTGTGGCACATCAAAAACCCCTCTCTGGAGAGGCGGTCCGGCCGGGCCCAAGTCTCTGTGCAACGCATGTGGGATCAGAAGCAGGAAGAAGAAGAGAGCTATTCTGGGCATGAACAAGGGAAGTAATGAAGAGAAAAAGGGCAAAAGAAGCAACAACAATGCTAAGATTGGGGAAAGTTTGAAGCAGAGATTAATGGCTCTGGGAAGGGAGGTTTTGATGCAGAGATCGACAGTTGAGAGGCAGAGGAAGAATCTGGGAGAGGAAGAACAAGCCGCTGTGTTGTTAATGGCTCTCTCCTATGGCTCTGTTTATGCTTAA 630 0.4714 MLIISVLFSTRSTRPGGWRLRXSLSSSPSASCCVCVGSSRASFNRKFPLPLSHFLILCSVQIFEIMVDLSGKGSEAEDPNNRNPNSDSSDKSPMSNEQKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKKRAILGMNKGSNEEKKGKRSNNNAKIGESLKQRLMALGREVLMQRSTVERQRKNLGEEEQAAVLLMALSYGSVYA 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0427 209 MobiDBLite consensus disorder prediction 72 103 - -
Lele45g0427 209 ProSiteProfiles GATA-type zinc finger domain profile. 96 132 IPR000679 GO:0006355|GO:0043565
Lele45g0427 209 SMART GATA_3 96 146 IPR000679 GO:0006355|GO:0043565
Lele45g0427 209 Gene3D - 96 161 IPR013088 GO:0006355|GO:0008270
Lele45g0427 209 Pfam GATA zinc finger 102 136 IPR000679 GO:0006355|GO:0043565
Lele45g0427 209 PANTHER OS01G0976800 PROTEIN 72 209 - -
Lele45g0427 209 CDD ZnF_GATA 101 136 IPR000679 GO:0006355|GO:0043565
Lele45g0427 209 ProSitePatterns GATA-type zinc finger domain. 102 127 IPR000679 GO:0006355|GO:0043565
Lele45g0427 209 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 94 136 - -
Lele45g0427 209 MobiDBLite consensus disorder prediction 76 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0427 Lele-ChrLele45 3324534 3326944 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0427 94 209 C2C2-Gata Transcription Factor Family AT3G06740 72.881 1.88e-51 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Lele45g0427 GATA 2.6e-16 CL0167