Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0426 ATGGTCGATCTGAGCGGAAAGGTGAAGGACACCAATAACAGAACCCCTACCGGTGATTCATCTGACGAAAGCCCAATGAGCAACGAGCAGAAGAAAACCTGCGCCGACTGTGGCACATCAAAAACCCCTCTCTGGAGAGGCGGTCCGGCCGGGCCCAAGTCTCTGTGCAACGCATGTGGGATCAGAAGCAGGAAGAAGAAGAGAGCGATTCTGGGCATAAACAAGGGAAGTAAGGAAGAGAAAAAGGGCAAAAGAAGCAGCAACAATGCTAAGATTGGGGAAAGTTTGAAGCAGAGATTAATGGCTCTGGGAAGGGAGGTTTTGATGCAGAGATCAACGGTGGAAAGGCAAAGGAAGAAGCTGGGAGAGGAAGAACAAGCGGCCGTGTTGTTGATGGCTCTCTCCTATGGCTCTGTTTATGCTTAA 426 0.5023 MVDLSGKVKDTNNRTPTGDSSDESPMSNEQKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKKRAILGINKGSKEEKKGKRSSNNAKIGESLKQRLMALGREVLMQRSTVERQRKKLGEEEQAAVLLMALSYGSVYA 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0426 141 CDD ZnF_GATA 33 68 IPR000679 GO:0006355|GO:0043565
Lele45g0426 141 ProSiteProfiles GATA-type zinc finger domain profile. 28 64 IPR000679 GO:0006355|GO:0043565
Lele45g0426 141 ProSitePatterns GATA-type zinc finger domain. 34 59 IPR000679 GO:0006355|GO:0043565
Lele45g0426 141 MobiDBLite consensus disorder prediction 70 95 - -
Lele45g0426 141 PANTHER OS01G0976800 PROTEIN 9 141 - -
Lele45g0426 141 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 26 68 - -
Lele45g0426 141 Gene3D - 28 93 IPR013088 GO:0006355|GO:0008270
Lele45g0426 141 MobiDBLite consensus disorder prediction 8 37 - -
Lele45g0426 141 MobiDBLite consensus disorder prediction 1 52 - -
Lele45g0426 141 Pfam GATA zinc finger 34 68 IPR000679 GO:0006355|GO:0043565
Lele45g0426 141 SMART GATA_3 28 78 IPR000679 GO:0006355|GO:0043565
Lele45g0426 141 MobiDBLite consensus disorder prediction 72 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0426 Lele-ChrLele45 3320386 3321032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0426 26 141 C2C2-Gata Transcription Factor Family AT3G06740 72.034 5.19e-52 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Lele45g0426 GATA 1.3e-16 CL0167