Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0424 ATGATCAGACCACATGATAGAGGGAATGAGACTCCTGTCTGTTGCGCAAGAGATTCCAATTTCAAGACAACCATCACCACAGACCAAGAGTCTCTACCTCGTCAGAGTGGTGATCTTTCAATTATGTACGATGTGACAAGTACTTATGAATCCAATTATTGGGCTGAGGTTACAATCTCAAACCATAATCCACTTGGTCGTCTTGATAACTGGAGATTAAGCTGGGAATGGATGAGACGAGAATTTATCTACTCAATGAAAGGTGCTTATACTTTTGTGGTTGATCCTTCTGAGTGTATCTTTGGCTCACAAGGGGGACACTACCAAGAACTTGACTTTTCCGTTGTGAATGGAACTATCTTGCCTCCATCAATGGACCCAAGTAAGTCATCTTCAAGGTTCCCAATGCAAGTCTACAAAATGCTACCAGACCTCAACCGTTCAGTGCTAACTCCACCCCAGAACTGGAAGATAAGTGGCACACTCAATCCTGACTACAAATGTGGCCCTCCGATTCGCGTGAGCCCGAGCGAAAACCCGGATCCTTCAGACAACACAGGAAGAACATGTAGTACAAATAGACCAGCCATGTTGCTTCCACCTGAGGCACTTCTTGTTCCATTCGAGAATCGTAGCGCCATGGCTGTTTCTTGGGCTGACATGAATCATTGTACAGTGCCAAACCCAATGCCCTGTGGAGATAACTGTGGGGTGACCATAAATTGGCATGTTCTTACAGATTACAAAAAAGGTTGGACTGCAAGAATCACACTTTTCAACTGGGGTGAGACTGCTTATGCAGATTGGTTTGTTGCAGCAGAAATGAACAAAGCTGGTCCAGGTTTTGAGAAGATGTATTCTTTCAATTCAAGTGCCTTGGAGGGAGTTATGAGTAACACTATAATGATGCAAGGTGCTTCAGGAAATAACTATCTTCTTGCAGAAAGAGATGGAGATGATCCTGAGAGAGATCCTAGGGTTCCTGGGAAACAACAATCAGTGATCTCATTTACAAAGAAAAGTACTCCTGGAGTCAATGTGGTTGGTGGAGATGGGTTTCCCACTAGAGTTCTCTTCAATGGTGAAGAATGCTCTCTTCCTTCTGTATTTCCAAGCAGTGGTTTCAAGAAAGAATTTTCTCTGTTCTTAACACTATCACTACTATTGTGTTTTACATTCTTTTTTAGGGGTTTATGTGTTTGA 1203 0.4289 MIRPHDRGNETPVCCARDSNFKTTITTDQESLPRQSGDLSIMYDVTSTYESNYWAEVTISNHNPLGRLDNWRLSWEWMRREFIYSMKGAYTFVVDPSECIFGSQGGHYQELDFSVVNGTILPPSMDPSKSSSRFPMQVYKMLPDLNRSVLTPPQNWKISGTLNPDYKCGPPIRVSPSENPDPSDNTGRTCSTNRPAMLLPPEALLVPFENRSAMAVSWADMNHCTVPNPMPCGDNCGVTINWHVLTDYKKGWTARITLFNWGETAYADWFVAAEMNKAGPGFEKMYSFNSSALEGVMSNTIMMQGASGNNYLLAERDGDDPERDPRVPGKQQSVISFTKKSTPGVNVVGGDGFPTRVLFNGEECSLPSVFPSSGFKKEFSLFLTLSLLLCFTFFFRGLCV 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0424 400 PANTHER COBRA-LIKE PROTEIN 7 117 184 - -
Lele45g0424 400 Pfam COBRA-like protein 53 103 IPR006918 GO:0010215|GO:0016020
Lele45g0424 400 Pfam COBRA-like protein 117 187 IPR006918 GO:0010215|GO:0016020
Lele45g0424 400 MobiDBLite consensus disorder prediction 178 193 - -
Lele45g0424 400 MobiDBLite consensus disorder prediction 167 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0424 Lele-ChrLele45 3302967 3305080 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0424 9 382 COBRA Gene Family AT4G16120 52.609 2.43e-165 477