Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0409 ATGGAAGACAGGCTAGCTTACCAAAAACATCAGGAGACGTTGGGGAAGACTCGGTTGAGGCAAGTCAAGCGAAAGAAACTCTCTCCCATTCCAACCAACCCAGCAGTGTCACGGGAGAATAATAACAAAAATGACAATAACAACAAGTCATCCGAGAAGAAGAAAAGCGGTGCAGGGAGGACTCGCAAGAACATTTACAGAGGAATCCGGCAAAGGCCGTGGGGCAAGTGGGCCGCAGAGATAAGGGACCCACACAAGGGCGTCCGAGTCTGGCTCGGCACCTTCAACACCGCCGAAGAAGCCGCCAGAGCCTATGACCAAGCCGCCAAGCGCATCCGTGGCGACAAAGCCAAGCTAAACTTCCCACCAGCTCCTCCTCCTGCTCCGGCTTCGGCTCCCCTGGAGCCTCCCCAGAAGAAGCAGTGCCTCGTCCCCAGCAGCCAAAACGAAGCCGTTCAGCTCAACCAACAAATCTCAACCATCGAATTCTTCCTCAGACTGGACGACAACAGCAACAACAACAACAACACTACTGATGTTTCGCAGCCGATCGGAGCAAGCGGTGGCTTACTCTCTGAGTGGGACCCGATGGACGATATCTGGATGCTCAACGACATCGTTATGCATCACCTTCATCAGAAAGGTCCCTACTAG 654 0.5367 MEDRLAYQKHQETLGKTRLRQVKRKKLSPIPTNPAVSRENNNKNDNNNKSSEKKKSGAGRTRKNIYRGIRQRPWGKWAAEIRDPHKGVRVWLGTFNTAEEAARAYDQAAKRIRGDKAKLNFPPAPPPAPASAPLEPPQKKQCLVPSSQNEAVQLNQQISTIEFFLRLDDNSNNNNNTTDVSQPIGASGGLLSEWDPMDDIWMLNDIVMHHLHQKGPY 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0409 217 MobiDBLite consensus disorder prediction 1 67 - -
Lele45g0409 217 SUPERFAMILY DNA-binding domain 65 122 IPR016177 GO:0003677
Lele45g0409 217 MobiDBLite consensus disorder prediction 117 148 - -
Lele45g0409 217 Pfam AP2 domain 66 114 IPR001471 GO:0003700|GO:0006355
Lele45g0409 217 MobiDBLite consensus disorder prediction 1 18 - -
Lele45g0409 217 MobiDBLite consensus disorder prediction 120 134 - -
Lele45g0409 217 CDD AP2 65 121 IPR001471 GO:0003700|GO:0006355
Lele45g0409 217 MobiDBLite consensus disorder prediction 45 59 - -
Lele45g0409 217 SMART rav1_2 65 128 IPR001471 GO:0003700|GO:0006355
Lele45g0409 217 FunFam Ethylene-responsive transcription factor 2 64 123 - -
Lele45g0409 217 Gene3D AP2/ERF domain 65 123 IPR036955 GO:0003700|GO:0006355
Lele45g0409 217 PANTHER DNA-BINDING DOMAIN 32 153 IPR044808 GO:0003700|GO:0009873
Lele45g0409 217 PRINTS Ethylene responsive element binding protein signature 88 104 IPR001471 GO:0003700|GO:0006355
Lele45g0409 217 PRINTS Ethylene responsive element binding protein signature 66 77 IPR001471 GO:0003700|GO:0006355
Lele45g0409 217 ProSiteProfiles AP2/ERF domain profile. 65 122 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0409 Lele-ChrLele45 3189847 3193496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0409 42 210 AP2-EREBP Transcription Factor Family AT3G16770 44.175 1.41e-43 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele45g0409 AP2 3.5e-15 CL0081