Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0401 ATGGTCTTCAAGGGAAGGTTTTTCTCCTCCAAAAAATCCGACTCTTCAAGCCCTGATGGGTCCTCCAATAATAGCCCGCGATCACTTGGTTCCAATTCATCCAGCAGATCCGAGAAGAAGAAGGTGAAATCAACTGCTAAAGAAGCCCAGATATTTAGTACCAGTAGTAGCGCTGTTGGCGGTAGCAGTGGTAGAGGGCTTGGTGTCGCTGCCGTGCGCCGGAAATTGCAAGTGAAGGATGGGATCAAGAAGGATGCCAATGGCAAGGAGAGTCAAACTCGAGCGGAGTCCCGTCTGACGTCGATGAGGCCAAGCTCAGGGGCGGAATTGGATTCGAGTTCGGAGTCTAAGTCAAAGAAGGCGACGGCGGTTGACGGAAAGGAATCTTCATCGTCCTCGGTTTCTCCAATTTTAGCATCCTCCCTTGGGTTGAACAGGATAAAGACGAGATCAGGACCGTTGCCACAGGAGAGTTTCTTTGGGTTTAGAAATGATAAGGGGTCCACTCTTGGTGCAAGTAACCCTTCTAGACTTGGTGGTAATGGGAGCTCAGGGTCAGCAAGTGAATTAAAGAAGGAGTTGGTGAATCAGAGCAGAGTGAAGAGTTCAAGCAGCGGAACTTGGCTTGATAATGGCATTAATTCCGATAGAACTTCGACTTGGAGTGCTCCGTCCTGGGACCAAAGCCCTAATGTATCAGCGCGGCCGCGGCTACAGAACGGGGAATCATCTTCCGCAGTAGGTAGACAGGATTCATCACCAAATCAATCTGGAGCCTTAAGAAATGCTGATGTTTGCACTCCGGCGACTTCATATGATTTTGAAAACCCCAAGGAATCTGAATCTCCTCGTTTCCAAGCTATATTACGGGTCACAAGTGCACCCAGAAAGAGGTTTCCTGGTGACATTAAGAGTTTTTCCCATGAGTTGAATTCCAAAGGTGTCCGACCTTATCCGTTTTGGAAGCCTCGAGGGTTAAATAACTTGGAGGGGGTCTTGGTTGCTATTCGGGCAAAATTTGATAAAGAAAAGGAAGAAGTGAACTCTGAACTTGCTATTTTTGCGGCAAACCTGGTTGTAGTTCTTGAAAAGAATGCAGATTCTCATCCTGAGTGGCAAGAGACAATAGAGGACTTACTGGTTTTGGCTAGGAGGTGTGCTATGACTACACCTGGGGAGTTTTGGCTTCAGTGTGAAGGCATAGTTCAGGAGTTGGATGATCGACGTCAAGAACTTCCTCCTGGGATGCTTAAGCAGCTTCACACCCGTATGCTTTTCATTCTTACGAGGTGTACTAGATTGTTGCAATTTCACAAAGAAAGTGGTTTGGCTGGGGATGAACACGTTTTTAATCTTCGACAATCTCGAGTCTTGCATTCTGCCGAAAAACGTATTCCTCCTGGCTTGGGAAGGGATGCAAAAAGTTCCAGTTCCGCGAAAGGCTCAAATCCCTCAGCAAAAAAATTTTATAGTCAGGAGCAGTGTATCTTAGATTGGAAAAACGATGTAAAGCCAGAGAGTCTTTCACTTCCTGTTCATGATGATAGTTCAAAACTCTTAGAGTCTCCTTCAGGGAGGGATCGGATGGCTTCTTGGAAGAAATTCCCATCTCCACCAGCAAAAAGTGCAAAGGAAACTGCTCAGTTGAAGGACCAAACCTATGGGAGAGTTGAATCTTCAAAACTTTCAAATAAAAGATCAAATTCTGATGTAGATCTATCTACTGCCAAGCCATCAGAGCATATTCCTGTCAATGACTCCCAGGAACATACTCTTAAGAACCAACAAAAAGTTTCTTGGGGCTACTGGGGAGATCAGCAGAATATCAGTGAGGAGAGTTCAATAATTTGTCGTATATGTGAGGAGCAAGTCCCTACTTCCAGTGTTGAAGATCATTCAAGGATTTGCTCTATTGCTGATAGATGTGATCAGAAGGGTCTGGGTGTCAACGAGCGTCTTATCCGAGTTGCTGATACGCTAGAGAAGATGATAGAATTATGTACACAGAAAGATATCCAACAAGCAGTTGGAAGTCCTGATGTTGCAAAAGTGTCGAATTCAAGCATGACTGAAGAATCTGATGTTATCTCCCCAAAACTTAGTGATTGGTCTCGCAGAGGCTCAGAGGATATGCTAGATTGTTTCCCTGAAGCTGATAATTCGGCTTTTATGGATGACCTAAAGGCCTTACCTCTTATATCATGTAAGACTCGTTTTGGTCCAAAGTCTGACCAAGGAATGACAACATCATCTGCTGGGAGCATGACTCCTAGGTCACCTTTACTGACACCAAAGATGAGTTATATTGACTTGCTCTTGGCAGGGAGGGGTGCTTATTCTGAACAAGATGATATTCCACAGGTATGTCTATTTTGCCCTGTTTTCTTCAGTTTGTTCTTTTGTCTTTACTGTGGTTTTTCACATTCACTTCAGCATTTTCCTGTTATTTTATTCTCGATGTGTTCTTTTATTATGAGTGCTTCAACAAATTCTTTTCTACTTGAGATGAATGAACTTGCCGATATAGCACGATGTGTAGCAAATACACCTCTGGATGATGATCGCTCAATCTCATATTTATTATCTTGTCTTGATGATTTGAGGGTTGTTGTAGAGAGGAGAAAATTTGATGCACTCACTGTGGAGACCTTTGGAACTTGTGTTGAGAAGCTGATACGGGAGAAGTATTTGCAGCTTACTGAGATGGTTGAAGATGAAAAGATTGACCTAGCTAGCACTGTAATTGAAGAAGATGCTCCTTTAGAAGATGATATGGTCCGTAGCTTGAGAACAAGCCCAGTCCACTCTTCAAAGGACCGGACCACTATTGATGACTTTGAGATTATAAAACCTATCAGTCGTGGGGCATTTGGACGGGTTTTCTTGGCTAAAAAGAGAACAACAGGGGATCTTTTTGCTATAAAGGTTCTCAAGAAGGCAGACATGATCCGTAAGAATGCTGTGGAAAGTATATTAGCTGAACGTGATATCTTAATCACGGTGCGCAATCCTTTTGTGGTTCGTTTCTTCTATTCTTTTACATGTAGTGAGAACCTGTACCTCGTCATGGAGTATCTTAATGGAGGGGATCTGTATTCATTATTAAGGAATTTAGGCTGCCTAGATGAGGAAGTTGCTCGTGTATATATTGCAGAAGTGGTCCTTGCACTAGAATATCTGCATTCACTGCGTATAGTTCATCGTGACTTGAAGCCTGACAATTTGTTGATTGCACATGATGGTCATATTAAGTTAACGGACTTCGGGCTTTCAAAAGTTGGTCTGATCAATAGCACTGATGATTTGTCTGGTCCAGCAGTGACTGGGACATCCCTCCTTGGGGAGGATGAACCTCAATTATCTACATCAGAACATCAAAGTGACAGGAGGAAAAAACGTTCTGCTGTGGGTACACCTGATTATTTAGCACCAGAGATACTGTTGGGAACTGGACATGGATATACTGCGGATTGGTGGTCTGTTGGTATCATTTTATTTGAATTGCTTGTTGGCATTCCACCTTTCAATGCAGAGCATCCTCAGACCATATTCGATAATATTCTTAATCGCAAGATCCCTTGGCCCCATGTTCCTGAAGAAATGAGTCCTGACGCACAAGATCTTATTGATCGATTATTAACTGAAGATCCTAGTCAGAGACTTGGAGCTGGAGGGGCGTCAGAGGTAAAGCAACATGTTTTTTTCAAGGATATAAACTGGGACACCCTTGCCAGGCAAAAGGCTGCATTTGTCCCTGCCTCTGAAAGTGCTCTAGATACCAGTTATTTCACAAGTCGCTATTCATGGAATACCACTGATGGCCTTGTGTATCCAGAAAGTGATGCTGAGTATTCTAGTGATGCAGATAGTTTAAGTGGCAGCAGTAGTTGCGTGAGCAATCGTCAAGATGAACTGGCTGCTCTAACCTTTCTTGATCTTGAATTGGACAACCCAAAATTTGTTCCCTCTGCTTGTCTAGCATGTTAA 3987 0.4352 MVFKGRFFSSKKSDSSSPDGSSNNSPRSLGSNSSSRSEKKKVKSTAKEAQIFSTSSSAVGGSSGRGLGVAAVRRKLQVKDGIKKDANGKESQTRAESRLTSMRPSSGAELDSSSESKSKKATAVDGKESSSSSVSPILASSLGLNRIKTRSGPLPQESFFGFRNDKGSTLGASNPSRLGGNGSSGSASELKKELVNQSRVKSSSSGTWLDNGINSDRTSTWSAPSWDQSPNVSARPRLQNGESSSAVGRQDSSPNQSGALRNADVCTPATSYDFENPKESESPRFQAILRVTSAPRKRFPGDIKSFSHELNSKGVRPYPFWKPRGLNNLEGVLVAIRAKFDKEKEEVNSELAIFAANLVVVLEKNADSHPEWQETIEDLLVLARRCAMTTPGEFWLQCEGIVQELDDRRQELPPGMLKQLHTRMLFILTRCTRLLQFHKESGLAGDEHVFNLRQSRVLHSAEKRIPPGLGRDAKSSSSAKGSNPSAKKFYSQEQCILDWKNDVKPESLSLPVHDDSSKLLESPSGRDRMASWKKFPSPPAKSAKETAQLKDQTYGRVESSKLSNKRSNSDVDLSTAKPSEHIPVNDSQEHTLKNQQKVSWGYWGDQQNISEESSIICRICEEQVPTSSVEDHSRICSIADRCDQKGLGVNERLIRVADTLEKMIELCTQKDIQQAVGSPDVAKVSNSSMTEESDVISPKLSDWSRRGSEDMLDCFPEADNSAFMDDLKALPLISCKTRFGPKSDQGMTTSSAGSMTPRSPLLTPKMSYIDLLLAGRGAYSEQDDIPQVCLFCPVFFSLFFCLYCGFSHSLQHFPVILFSMCSFIMSASTNSFLLEMNELADIARCVANTPLDDDRSISYLLSCLDDLRVVVERRKFDALTVETFGTCVEKLIREKYLQLTEMVEDEKIDLASTVIEEDAPLEDDMVRSLRTSPVHSSKDRTTIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCSENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSLRIVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVTGTSLLGEDEPQLSTSEHQSDRRKKRSAVGTPDYLAPEILLGTGHGYTADWWSVGIILFELLVGIPPFNAEHPQTIFDNILNRKIPWPHVPEEMSPDAQDLIDRLLTEDPSQRLGAGGASEVKQHVFFKDINWDTLARQKAAFVPASESALDTSYFTSRYSWNTTDGLVYPESDAEYSSDADSLSGSSSCVSNRQDELAALTFLDLELDNPKFVPSACLAC 1328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0401 1328 Gene3D Phosphorylase Kinase; domain 1 944 1264 - -
Lele45g0401 1328 MobiDBLite consensus disorder prediction 167 264 - -
Lele45g0401 1328 MobiDBLite consensus disorder prediction 1121 1136 - -
Lele45g0401 1328 MobiDBLite consensus disorder prediction 125 147 - -
Lele45g0401 1328 Coils Coil 326 346 - -
Lele45g0401 1328 ProSiteProfiles AGC-kinase C-terminal domain profile. 1236 1320 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lele45g0401 1328 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1065 1077 IPR008271 GO:0004672|GO:0006468
Lele45g0401 1328 MobiDBLite consensus disorder prediction 546 575 - -
Lele45g0401 1328 MobiDBLite consensus disorder prediction 1 66 - -
Lele45g0401 1328 Gene3D Transferase(Phosphotransferase) domain 1 1030 1253 - -
Lele45g0401 1328 ProSiteProfiles Protein kinase domain profile. 946 1235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g0401 1328 FunFam probable serine/threonine protein kinase IREH1 944 1033 - -
Lele45g0401 1328 MobiDBLite consensus disorder prediction 80 264 - -
Lele45g0401 1328 SMART serkin_6 946 1235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g0401 1328 MobiDBLite consensus disorder prediction 9 33 - -
Lele45g0401 1328 Pfam Protein kinase domain 946 1235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g0401 1328 PANTHER SERINE/THREONINE-PROTEIN KINASE 591 1268 - -
Lele45g0401 1328 MobiDBLite consensus disorder prediction 461 487 - -
Lele45g0401 1328 MobiDBLite consensus disorder prediction 93 112 - -
Lele45g0401 1328 MobiDBLite consensus disorder prediction 1107 1136 - -
Lele45g0401 1328 MobiDBLite consensus disorder prediction 47 62 - -
Lele45g0401 1328 MobiDBLite consensus disorder prediction 507 583 - -
Lele45g0401 1328 SUPERFAMILY Protein kinase-like (PK-like) 943 1279 IPR011009 -
Lele45g0401 1328 CDD STKc_MAST_like 952 1240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0401 Lele-ChrLele45 3121569 3133649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0401 74 1300 AGC Kinase Gene Family AT3G17850 64.734 0.0 1546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Lele45g0401 Pkinase 9.3e-66 CL0016