Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0394 ATGAGTGGTGAGAAAAGAGAAGAATATTCGGCATTTGATGAGAAAGAGGAAGAAGAAGAAGAGAAAGATCATGAGATCCTCAAGAGCAGAATCTCTAACCATCCACTTTATGACCTTCTCGTTCAACAACACCTCAATTGTTTGAAGGTGGGTGAGATTTGCAACTTGGAGAAAGTGAAGAAGAAGGAAGATAGAAAGAAGAAAGCAATGAAGAAGCAAAACCTGGGCATGCTTAGTCATTCAGAGCTCGATCACTTCATGGAAGCATATTGTATGGCACTAGGGACGCTGAAAGAAGCAATGGAGGAGCCTCAAACAGAATCACTGGCTTTCATCAAGAACATGCATTCTCAACTCAGAGACCTCACTGATGGATTAACCCTCTCTTCTTCTTCTTCATCGTCGTCGTCTCACTCCAACTTCCAAACACGTCCTTGA 438 0.4247 MSGEKREEYSAFDEKEEEEEEKDHEILKSRISNHPLYDLLVQQHLNCLKVGEICNLEKVKKKEDRKKKAMKKQNLGMLSHSELDHFMEAYCMALGTLKEAMEEPQTESLAFIKNMHSQLRDLTDGLTLSSSSSSSSSHSNFQTRP 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0394 145 SMART KNOX1_2 25 65 IPR005540 GO:0003677|GO:0005634
Lele45g0394 145 SMART KNOX2_2 73 124 IPR005541 GO:0003677|GO:0005634
Lele45g0394 145 MobiDBLite consensus disorder prediction 1 27 - -
Lele45g0394 145 MobiDBLite consensus disorder prediction 123 145 - -
Lele45g0394 145 Pfam KNOX1 domain 27 51 IPR005540 GO:0003677|GO:0005634
Lele45g0394 145 Pfam KNOX2 domain 81 123 IPR005541 GO:0003677|GO:0005634
Lele45g0394 145 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 7 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0394 Lele-ChrLele45 3069724 3071029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0394 26 126 Homeobox Transcription Factor Family AT1G23380 34.259 4.44e-12 60.5