LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele45g0386	ATGTTTATTCATTATTTAGGCTATGGAGACATTCATGCGGTCAATGTCAGGGAAATGATATTTGTCATGGTTTATGTCTCCTTTGATATGATTCTCGGAGCCTACCTTCTTGGTAATATGACAGCATTGATTGTGACAGGATCGGAAACAGAGAGAGTCCATGAAGAGTTTTTCCTTCCAGGAGAAGTGATTATGGAGCAAGGAAATGTAGCCAATCAATTTTACCTTGTATGCGATGAAGATGTTGATAAAGAAGTGTTCATAAAGCGTTTGCAAAACTACTGTTTCTTTGGCGAGGTTTCTGTTCTTTGTGATATACCTAAATCTTCAACTATACGAGCATCTTCTCTTGATATGTCGATATTTCACGACTCCAGTCTTCAGCAGAAGTTCCTACAGTCAAACTTCTCCTTGACTCTTGAAAACCATGAAATTATGAGAATAAATTGTGCTGCATATGAAGGAGATGTTCACTTTTTGAAACGTTTGATTGAATCAGAAGCATATCCCAATAAGACCGATTACGATGGTATATCACCCTTGAATGCATCCACCAATATATTAAGGGTGATCACATCCAGATGTTACAGATTGTGGAAGCATTTCATTCTGTTATGGGCAGTGTACTCTTCCTTCTTCACTCCTCTGGAGTTTGGATTCTTCAGAGGATTGCCGGAGGAAGGCTTCTTGCTCGACATCGCCGGCCAGTTTGCTTTCCTCATTGACATCGCCATCCGATTCTTCGTCGCCTATCGTGACATCCATCCCTATTGCATGGTCTACGATCACACACAAATCACCATGAGGTACCTGAAGTCTCGGTTCACAGTTGATATTCTTAGCTGTTTTCCGTGGGATTATATTTACAAGGGTACTGGGAGGAAAGAAGTCATCAGGATTGCGAAACTTCTTGTTGTAGAACTTTATTGCACCCACACAGCTGCCTGTATCTTCTACTATCTTGCTACCACTTTGCCTCCATCTAACGAAAGTTATACATGGATGGGCAGCTTAAAGATGGGTGATTATAGCTATTCAGACTTTAGACACATATCTTTGGAAGCGTTATGTGACATCACTCTACTTTGCAATTGTTACCATGGCAACTGTTGTTGGTTATCTAGAGGCTATGGAGACATTCATGCAGTCAATGTCAGGGAACTGATATTTGTGATGGTTTATGTCTCCTTTGATATGATTCTTGGTGCCTACCTAGCTGCCGTGCTTCAGGATATTCCAGCCTCTATTGGTGCAAAGGTTTTTGTAACAGTGAATGCTGCAACTATTTTGATGTTAGTTTGTCATGTTTTCCTTCTTTTTGGTTAA	1326	0.4042	MFIHYLGYGDIHAVNVREMIFVMVYVSFDMILGAYLLGNMTALIVTGSETERVHEEFFLPGEVIMEQGNVANQFYLVCDEDVDKEVFIKRLQNYCFFGEVSVLCDIPKSSTIRASSLDMSIFHDSSLQQKFLQSNFSLTLENHEIMRINCAAYEGDVHFLKRLIESEAYPNKTDYDGISPLNASTNILRVITSRCYRLWKHFILLWAVYSSFFTPLEFGFFRGLPEEGFLLDIAGQFAFLIDIAIRFFVAYRDIHPYCMVYDHTQITMRYLKSRFTVDILSCFPWDYIYKGTGRKEVIRIAKLLVVELYCTHTAACIFYYLATTLPPSNESYTWMGSLKMGDYSYSDFRHISLEALCDITLLCNCYHGNCCWLSRGYGDIHAVNVRELIFVMVYVSFDMILGAYLAAVLQDIPASIGAKVFVTVNAATILMLVCHVFLLFG	441

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele45g0386	441	ProSiteProfiles	cAMP/cGMP binding motif profile.	53	116	IPR000595	-
	Lele45g0386	441	PANTHER	POTASSIUM CHANNEL AKT1	297	406	IPR045319	GO:0005249\|GO:0006813
	Lele45g0386	441	CDD	CAP_ED	51	124	IPR000595	-
	Lele45g0386	441	Gene3D	Jelly Rolls	49	154	IPR014710	-
	Lele45g0386	441	SUPERFAMILY	cAMP-binding domain-like	52	116	IPR018490	-
	Lele45g0386	441	SUPERFAMILY	Voltage-gated potassium channels	7	58	-	-
	Lele45g0386	441	SUPERFAMILY	Voltage-gated potassium channels	193	411	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele45g0386	Lele-ChrLele45	3011568	3019690	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele45g0386	193	405	Ion Channels	AT3G02850	56.327	5.55e-87	275