Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0384 ATGAGCAGACTAGACGGACACGAAGACGACGACGAGGATGGAGAGTGCAACGCCGCGAGGAAGCAGCCACGCAAAAGATTTCTGTTTCGTCCTCGCATTACATCATCTTTATATGTTGCGATGAGGACAGAAGATGTTGATAAAGAAGTGTTCATAAAGCGTTTGCAAAACTACTGTTTCTTTGGCGAGGTTTCTGTTCTTTGTGATATACCTAAATCTTCAACTATACGAGCGTGTGAATTTTGCAAGGTTTTGCGACTTGATAAGCATTCCTTTATAGCAACACTGAAGGTATATTTTGCAGATGGTCGAGTTATCTTGAACAATCTCGTTGAGGGAAAAGGCTTCAGTCTTCAGCAGAAGCTCCTGCAATCAAACTTCTCCTTGACTCTTGAAAACCATGAAACAGAGATGGTTATGAGAATGAATTGTGCTGCATATGAAGGAGATTTTCACGTTTTGAAATGTTTGATTGAATCAGGAGCAGATCCCAATAAGACGGATTATGATGCCATCAAGAATGGACATGAAGAAGTAGCTTCTTTACTTGTGGATGCGGGGGCTACTCTTACCGTGGATCATGGTGGGAATTTTCTCTGCATGACTGTTGCAAAGAAGGAGTTGAACCTTCTAAGACGGGTCTTGGATTGTGGTATTAATCCAAATGCCAGAAATTATGATCAGCGTACACCTCTTGACATGGCTGCCTCTGAAGGTTCGTGTAAAATGGCTAAGTTGCTTCTAGAAGAAGGAGCAAGTGTTCTGTCAAAGGACATATGGGGGAATACACCGATTGATGAAGCTCATATGGGTGGAAATAGGAACACGATCAAAATGCTCCAAGTTGCAAAAATTTCTCAGTTGACCGAATTATCCCACAATATACAAGAACCTCGAGGGGAGTTTTTCGTCCCTCTGGCAGAGAATGAGAAATAA 936 0.4209 MSRLDGHEDDDEDGECNAARKQPRKRFLFRPRITSSLYVAMRTEDVDKEVFIKRLQNYCFFGEVSVLCDIPKSSTIRACEFCKVLRLDKHSFIATLKVYFADGRVILNNLVEGKGFSLQQKLLQSNFSLTLENHETEMVMRMNCAAYEGDFHVLKCLIESGADPNKTDYDAIKNGHEEVASLLVDAGATLTVDHGGNFLCMTVAKKELNLLRRVLDCGINPNARNYDQRTPLDMAASEGSCKMAKLLLEEGASVLSKDIWGNTPIDEAHMGGNRNTIKMLQVAKISQLTELSHNIQEPRGEFFVPLAENEK 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0384 311 Gene3D - 194 298 IPR036770 -
Lele45g0384 311 CDD CAP_ED 42 107 IPR000595 -
Lele45g0384 311 ProSiteProfiles cAMP/cGMP binding motif profile. 39 92 IPR000595 -
Lele45g0384 311 ProSiteProfiles Ankyrin repeat profile. 227 259 IPR002110 GO:0005515
Lele45g0384 311 ProSiteProfiles Ankyrin repeat region circular profile. 227 258 - -
Lele45g0384 311 Gene3D Jelly Rolls 13 127 IPR014710 -
Lele45g0384 311 Pfam Cyclic nucleotide-binding domain 42 97 IPR000595 -
Lele45g0384 311 SUPERFAMILY cAMP-binding domain-like 47 110 IPR018490 -
Lele45g0384 311 PANTHER POTASSIUM CHANNEL AKT1 170 292 IPR045319 GO:0005249|GO:0006813
Lele45g0384 311 SUPERFAMILY Ankyrin repeat 110 281 IPR036770 -
Lele45g0384 311 Pfam Ankyrin repeats (many copies) 215 268 IPR002110 GO:0005515
Lele45g0384 311 Gene3D - 142 193 IPR036770 -
Lele45g0384 311 SMART ANK_2a 137 166 IPR002110 GO:0005515
Lele45g0384 311 SMART ANK_2a 260 290 IPR002110 GO:0005515
Lele45g0384 311 SMART ANK_2a 169 192 IPR002110 GO:0005515
Lele45g0384 311 SMART ANK_2a 194 223 IPR002110 GO:0005515
Lele45g0384 311 SMART ANK_2a 227 256 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0384 Lele-ChrLele45 3001117 3004515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0384 61 258 Ion Channels AT5G37500 38.462 3.34e-53 183