Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0374 ATGGTAGTGAAATCTACAATAATCGACAAAGAGCCGGTGCATCGGGTGGTGAGCCTGCTGTTAGAAGCCGAAGCAGCGGTTGAAGAAAGCTCTGATGCTGTTGGCATTGATGATCCTATAAAGAAGTTTGAGGATTGCGGTAAGACTTGTATATCGCATACAAGCAGCTTACCTATCCATGGGGAAGCTTCGGCAAAAGCGGCTCTGTACAGGGACAGATTTCTGTTACTGTTCCAGAGGCTCTCTCGTGACCAGCATTTTGCAAAGCCGGCTTTTGATTCTGAGTGTTCGCATTTTGGAAGCTGTGAGATATCTCCTGTCCAACCTCTGGTTGGGCAAACAGAGAACACCATAATTGTGGCAGAAGGTGAGATGCTGGCGGGGGGTGTTTTTCAGATCAGACTAGCAGAGATGGAAAAGAGAGCAGTCAATGACATGTTTGTTATACTGTCTGATATCTGGCTATACGGTGAAGAGGCTATGGGAAAGCTGCAGACTGTACTGGATGGTTTTGAGATTGTGGAAGTGGTCCCTTCTTTATTTGTTTTCATGGGAAACTTCTCTTCTCATCCAGGCAACCTTTCTTTTCATTCTTACTCAAGCCTCCGGTTGCAGTTTGATAAGCTAGGGCAAATGATTGCCTCCCATCCACGGCTAATAGAGAAAAGTCGATTTTTTTTCATTCCGGGTCCTGATGATCCTGGGATTTGA 711 0.4571 MVVKSTIIDKEPVHRVVSLLLEAEAAVEESSDAVGIDDPIKKFEDCGKTCISHTSSLPIHGEASAKAALYRDRFLLLFQRLSRDQHFAKPAFDSECSHFGSCEISPVQPLVGQTENTIIVAEGEMLAGGVFQIRLAEMEKRAVNDMFVILSDIWLYGEEAMGKLQTVLDGFEIVEVVPSLFVFMGNFSSHPGNLSFHSYSSLRLQFDKLGQMIASHPRLIEKSRFFFIPGPDDPGI 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0374 236 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 4 119 IPR016266 GO:0003677|GO:0006261|GO:0008622
Lele45g0374 236 Pfam DNA polymerase alpha/epsilon subunit B 147 234 IPR007185 GO:0003677|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0374 Lele-ChrLele45 2929844 2933036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0374 4 235 Core DNA Replication Machinery Family AT5G22110 46.667 7.06e-80 246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0374 45 2929844 2933036 Lele47g1022 47 16111858 16122601 hybridization
Lele45g0374 45 2929844 2933036 Lele48g1088 48 15667971 15678143 hybridization