Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0365 ATGCTGCAGATGCTCATTTCCTGTGGACCCCACCCACACACCAAAAGGCGACTTGCTCAAGAAGAAAGGTCTCGAGGCGACTTGCTCAACAAGCAGAGTATCGAGGAAGGAAGGAGGAAGGAAGGAGGTGATAGGGACAGAGTGGGTTTGTGGTTTCTTACTTTTTGTTCTGTTGTGTTTTCTCTGTCGAAGTTCGGATTATACTGGATGCGATTTGACTCTGGGTCCGATCTAACCCGGATTCTGATGATTTCGGCTTCTTGCATTTTGACTGTTGGATTTATTTTGCTCATCATGGTAAGGAAAAGGGGAACTGAAGCACCTAGTGGAGGTGAAAGCTCTGAGACTCAGGAGAGTGGGGGCATTAGTCGAGGACCTCAACACCATGTTGAAAGAAGTGCTCCACCCACACAGCAGGCAACAGGAGGGGGATTATCCCAACGAGGTAGAGGTTGGGGTCCTCAAGGAGGACGGGGAGGTTATAGTAGGGGCCGTGGTCGTGGGATACCCCAACAGCAGTATGGTGCTGCCCCTGAATATCAAGAAAGGGGGAGGGGAGGGTACTCTCAGCAGTTAGGTCGTGGACGTGATGGTGGGGGCAATGGCAGTGGCCGTGGTAGTGGACCTTCTTATGGTGGCCCATCTGGCCCTCAAGCTCCCGAACTGCACCAAGCTACCCCTGTTCCACATCATGCTGGGGTGGCTCCTCAATTCTCAACATCTGAGGCTAGTGCTTCTTCCCAACAATTTGATCCCTCTCAAGTGGAACAACAAATGGGGCAGATGACTATTCATTCAGAGTCTGTTTCTCCTGCCCCACCCTCAAGTAAATCAGTGAGGTTTCCCCTTAGGCCTGGAAAGGGTAGCTATGGCACCAAGTGTGTTGTTAAGGCTAACCACTTCTTTGCAGAGTTACCTAATAAAGATTTGCACCAGTATGATGTTACTATCACTCCAGAAGTGACATCAAGGGGTGTAAACCGTGCTGTTATGAAGCAGCTGGTGAGGCTTTATCGAGAGTCTCATTTGGGTAAGAGACTTCCTGTGTTTGATGGGCGCAAGAGCCTTTGCACTGCTGGTCCTCTTCCTTTCCTTTCGAAGATGTTTGAAATCACTCTCCTTGACGAAGATGATGGATCGGGAGGGCCAAGAAGAGAGAGGAAGTTCAAAGTTGTGATAAAATTTGCTGTCCGGGTAAATCTACATCATCTAGGACTCTTTCTGCAGGGAAGGCAGACTGATGCTCCTCAAGAAGCTCTTCGGGTTCTTGACATCGTACTGCGTGAACTACCTACCTCTAGGTATTGTCCTGTGGGGAGATCATTTTATTCACCAGATCTGGGTAGAAGGCAACCATTAGGTGATGGTTTGGAAAATTGGCGTGGCTTCTATCAAAGTATTCGTCCTACTCAAATGGGATTATCTCTAAATATTGATATGTCCTCAAGTGCATTTTTTGAACCTTTGCCCGTAATAGAATTTGTTACCAAGTTGCTCAATCGGGATGTCACCGCCCGCCCATTGTCTGATTCAGATCGTGTAAAGATAAAGAAAGCACTTCGGGGTGTCAAAGTTGAAGTGACACACCGTGGAAATATGAGAAGAAAATATCGCATCTCTGGTCTGACTTCACAGGCAACCCGAGAGCTAACGTTTCCCGTTGATGCAAGTGGAACACTGAAGTCTGTTGTTGAGTATTTTTCGGAAACATATGGATTTGTCATTCAACATACCCAATGGCCTTGCTTGCAAGTGGGCAATGCGCAGAGACCAAACTATTTACCAATGGAGGTTTGTAAGATAGTAGAAGGTCAAAGGTACTCTAAGAGATTGAATGAAAGCCAGATTACTGCTTTGCTCAGAGTCACATGCCAGCGTCCTGTTGAAAGGGAGAGTGATATTATGCAGACAGTTCATCATAATGCTTACCGTGATGATCCTTATGCTAAAGAGTTTGGGATTAACATCAATGAAAAGATGGCTCAAGTTGAAGCTCGCATTCTTCCTGCACCTCGGCTTAAATATCATGATACAGGTAGAGAAAAGGATTGTCTACCTCAAGTTGGCCAATGGAATATGATGAATAGGAAAATGATTAATGGTGGGACAGTCAACCACTGGATCTGCATCAACTTTTCCAGAAATGTTCAAGATAGTGTTGCAAGGGGGTTTTGTTATGAACTTGCTCAAATGTGTTGTATATCTGGCATGGCATTCAATTCTGAGCCAGTGCTTCCCACACTTAGTGCCCGTTCTGATTTGGTGGATAAGGTTCTCAAAATTCGGTATCATGAAGCAAAAACCAAACTGATGGGGAAGGAGCTTGATCTTCTGATTGTTATTTTGCCTGATAAGAATGGTTCTCTTTATGGTGACCTGAAACGTATATGTGAGACAGATCTAGGGGTTGTTTCTCAGTGCTGTTTGACTAAGCATGTCCATAAAATGAGCAAGCAGTATCTTGCAAATGTTGCCTTGAAAATTAATATAAAAGTAGGTGGAAGGAACACAGTGCTTGTTGATGCACTTTCACGGCGTATACCTCTAGTTAGTGACCGACCGACAATTATTTTTGGCGCTGATGTTACTCATCCACATCCTGGAGAGGATTCAAGTCCATCCATAGCAGCTGTTGTGGCCTCTCAAGATTGGCCTGAAATCACAAAGTATGCTGGTTTGGTGCGTGCTCAAGCACATAGACAGGAGCTCATTGAAGACCTCTTCAAAAAATGGCAGGATCCTGTCAGGGGAACAGTAACTGGTGGAATGATTAGGGAGCTTCTTATATCTTTCCGGAGGGCCACTGGGCAGAAGCCGCAGCGCATTATATTTTACAGGGATGGTGTGAGTGAGGGGCAGTTCTCTCAAGTTTTACTGTCTGAAATTGATGCTATCCGCAAGGCTTGTGATTCCCTGGAACCTAATTATCAGCCTCCTGTAACATTTGTTGTGGTTCAGAAGCGCCATCATACTAGGCTCTTTGCCAGCAACCATCGTGACAAGAGTTCTGTTGACCGGAGCGGGAACATATTGCCCGGCACTGTTGTAGACTCTAAGATTTGTCATCCTACTGAGTTCGACTTTTATCTCTGTAGCCATGCTGGGATTCAGGGAACAAGCCGTCCAGCTCATTACCACGTGTTATGGGATGAAAACAATTTTACAGCTGATACACTGCAAACATTGACAAACAACCTTTGTTACACTTATGCTAGATGCACTCGTTCTGTTTCAATTGTGCCGCCTGCATATTATGCTCATTTGGCTGCGTTCCGAGCTCGATTTTATATGGAACCTGAGACGTCAGAGAGTGGATCCATGACCAGTGGTGGTGGTGCAGTGCGGAGCACTCGACCTTCTGGTGGTGGGGCTACCGTTAGGCCTCTTCCAGCTCTTAAGGAGAATGTCAAGAGGGTTATGTTCTATTGTTAA 3432 0.4598 MLQMLISCGPHPHTKRRLAQEERSRGDLLNKQSIEEGRRKEGGDRDRVGLWFLTFCSVVFSLSKFGLYWMRFDSGSDLTRILMISASCILTVGFILLIMVRKRGTEAPSGGESSETQESGGISRGPQHHVERSAPPTQQATGGGLSQRGRGWGPQGGRGGYSRGRGRGIPQQQYGAAPEYQERGRGGYSQQLGRGRDGGGNGSGRGSGPSYGGPSGPQAPELHQATPVPHHAGVAPQFSTSEASASSQQFDPSQVEQQMGQMTIHSESVSPAPPSSKSVRFPLRPGKGSYGTKCVVKANHFFAELPNKDLHQYDVTITPEVTSRGVNRAVMKQLVRLYRESHLGKRLPVFDGRKSLCTAGPLPFLSKMFEITLLDEDDGSGGPRRERKFKVVIKFAVRVNLHHLGLFLQGRQTDAPQEALRVLDIVLRELPTSRYCPVGRSFYSPDLGRRQPLGDGLENWRGFYQSIRPTQMGLSLNIDMSSSAFFEPLPVIEFVTKLLNRDVTARPLSDSDRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPVDASGTLKSVVEYFSETYGFVIQHTQWPCLQVGNAQRPNYLPMEVCKIVEGQRYSKRLNESQITALLRVTCQRPVERESDIMQTVHHNAYRDDPYAKEFGININEKMAQVEARILPAPRLKYHDTGREKDCLPQVGQWNMMNRKMINGGTVNHWICINFSRNVQDSVARGFCYELAQMCCISGMAFNSEPVLPTLSARSDLVDKVLKIRYHEAKTKLMGKELDLLIVILPDKNGSLYGDLKRICETDLGVVSQCCLTKHVHKMSKQYLANVALKINIKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVRAQAHRQELIEDLFKKWQDPVRGTVTGGMIRELLISFRRATGQKPQRIIFYRDGVSEGQFSQVLLSEIDAIRKACDSLEPNYQPPVTFVVVQKRHHTRLFASNHRDKSSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADTLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSESGSMTSGGGAVRSTRPSGGGATVRPLPALKENVKRVMFYC 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0365 1143 MobiDBLite consensus disorder prediction 1102 1128 - -
Lele45g0365 1143 SUPERFAMILY PAZ domain 295 630 IPR036085 GO:0005515
Lele45g0365 1143 Pfam Mid domain of argonaute 686 760 IPR032473 -
Lele45g0365 1143 Pfam Glycine-rich region of argonaut 175 269 IPR024357 -
Lele45g0365 1143 Pfam Argonaute linker 2 domain 629 675 IPR032472 -
Lele45g0365 1143 Gene3D - 846 1143 IPR036397 GO:0003676
Lele45g0365 1143 Pfam PAZ domain 494 618 IPR003100 GO:0005515
Lele45g0365 1143 Gene3D - 667 840 - -
Lele45g0365 1143 MobiDBLite consensus disorder prediction 9 42 - -
Lele45g0365 1143 MobiDBLite consensus disorder prediction 14 42 - -
Lele45g0365 1143 CDD PAZ_argonaute_like 488 602 - -
Lele45g0365 1143 FunFam protein argonaute 10-like 846 1143 - -
Lele45g0365 1143 MobiDBLite consensus disorder prediction 105 284 - -
Lele45g0365 1143 MobiDBLite consensus disorder prediction 109 123 - -
Lele45g0365 1143 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 268 1099 - -
Lele45g0365 1143 ProSiteProfiles Piwi domain profile. 777 1098 IPR003165 GO:0003676
Lele45g0365 1143 SMART DUF1785_2 436 488 IPR014811 -
Lele45g0365 1143 Pfam N-terminal domain of argonaute 292 427 IPR032474 -
Lele45g0365 1143 SMART PAZ_2_a_3 493 625 IPR003100 GO:0005515
Lele45g0365 1143 Gene3D paz domain 483 607 - -
Lele45g0365 1143 SUPERFAMILY Ribonuclease H-like 764 1098 IPR012337 -
Lele45g0365 1143 Pfam Piwi domain 778 1097 IPR003165 GO:0003676
Lele45g0365 1143 Pfam Argonaute linker 1 domain 437 486 IPR014811 -
Lele45g0365 1143 CDD Piwi_ago-like 647 1097 IPR045246 -
Lele45g0365 1143 FunFam Argonaute 10 667 840 - -
Lele45g0365 1143 FunFam Protein argonaute-2 482 608 - -
Lele45g0365 1143 SMART Piwi_a_2 777 1098 IPR003165 GO:0003676
Lele45g0365 1143 MobiDBLite consensus disorder prediction 237 275 - -
Lele45g0365 1143 ProSiteProfiles PAZ domain profile. 489 603 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0365 Lele-ChrLele45 2865841 2873181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0365 179 1143 Eukaryotic Initiation Factors Gene Family AT1G48410 77.505 0.0 1523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0365 45 2865841 2873181 Lele47g1029 47 16159424 16164784 hybridization
Lele45g0365 45 2865841 2873181 Lele48g1093 48 15711708 15717484 hybridization