Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0357 ATGATGCTTGTGAACACGTGGCATCTCTTGTTGAATATGTTTGTTGGGGGTTATGTCAAAGCTGAAAATGTGAATAAAGAAAGGAAGAAAAAACAGAGATTCCCATCCTATGGATTCAATGCATCTTTGTCTTTTCGCATTTGCGTTGAGAAATTCGCATTCTCTTTCACCCTCCCTTTACTAGACATCAAAATGAATCCACACCACATTTGTATAGATGGAGACCTCCCATATTATGATAAAATCGTTCTTTTGAGTAAGGCGAATTTCGTGCTAGGGCGCAGAACGCTTCTTCTGTATCTCGCCGCTTCGTTACTTGCTCTCTCCGCTCTACGGTTTATAAATTCTGATTGTTCAAAAATGGCCGATGCTCATGATACCGATAAGAACATTGAGGTGTGGAAGATCAAGAAATTGATCAAAGCCTTGGAGGCTGCTCGAGGAAATGGGACAAGCATGATTTCTCTTATCATGCCTCCACGTGATCAGATATCTCGTGTAACCAAGATGCTTGGTGATGAGTTTGGAACCGCATCAAACATAAAAAGCAGAGTGAATAGGCAGTCTGTGCTTGGTGCTATCACTTCTGCTCAGCAGAGGCTTAAGCTTTATAACAGGGTTCCTCCAAATGGGCTTGTTCTGTATACTGGGACAATTGTCACAGAAGATGGAAAGGAGAAGAAGGTGACCATAGATTTTGAGCCATTTAGACCTATCAATGCATCTCTCTATCTTTGTGACAACAAGTTTCATACAGAAGCTCTCAATGAGCTTCTGGAATCTGATGACAAGTTTGGTTTCATAGTCATGGATGGGAATGGCACACTTTTTGGTACCTTAAGTGGCAATACAAGAGAGGTGCTTCATAAATTTAGTGTGGATCTGCCGAAGAAGCATGGAAGAGGAGGTCAGTCAGCCCTACGATTTGCCCGTCTTCGGATGGAGAAGCGTCATAACTATGTGAGGAAGACTGCGGAGCTTGCTACACAGTTTTATATTAATCCTGCTACCAGTCAGCCCAATGTTTCAGGATTAATTCTTGCTGGTTCAGCAGACTTCAAAACTGAGCTTAGCCAGTCAGATATGTTTGATCCTCGACTTCAGGCAAAAATACTTAATGTTGTTGATGTGTCTTACGGAGGGGAGAACGGCTTCAATCAGGCTATTGAACTGTCATCAGAAATTCTGGCCAATGTGAAGTTCATCCAGGAGAAACGGTTGATTGGAAAATACTTTGAGGAGATTAGTCAGGATACTGGCAAGTATGTTTTTGGGGTTGATGATACTCTTAAAGCGCTGGAGATGGGTGCAGTTGAGATACTTATCGTCTGGGAAAGTCTGGATATAAATAGGTATGTCCTGAAACACAGCACTAGTGGTGAAGTTGTTATAAAACATTTCAACAAGGAACAAGAGGCCAACCAGGACAATTTTCGGGATTCTGGAAATGCTGAACATGAGGTTCAGGAAAAGATGTCTCTCTTGGAGTGGTTTGCCAATGAGTACAGACGGTTTGGCTGCACTCTTGAGTTTGTCACTAATAAATCACAAGAGGGCTCACAGTTTTGCAGGGGTTTTGGTGGTATAGGGGGGATTCTGCGCTACCAGCTTGATATGAGGACATTTGATGACTTTTCTGATGATGAAAATGCGTATGATGATTCTGAATAG 1671 0.4225 MMLVNTWHLLLNMFVGGYVKAENVNKERKKKQRFPSYGFNASLSFRICVEKFAFSFTLPLLDIKMNPHHICIDGDLPYYDKIVLLSKANFVLGRRTLLLYLAASLLALSALRFINSDCSKMADAHDTDKNIEVWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNRVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILANVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVEILIVWESLDINRYVLKHSTSGEVVIKHFNKEQEANQDNFRDSGNAEHEVQEKMSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRTFDDFSDDENAYDDSE 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0357 556 Pfam eRF1 domain 3 401 537 IPR005142 -
Lele45g0357 556 SUPERFAMILY L30e-like 398 539 IPR029064 -
Lele45g0357 556 FunFam Eukaryotic peptide chain release factor subunit 1 256 397 - -
Lele45g0357 556 Gene3D eRF1 domain 2 256 397 IPR042226 -
Lele45g0357 556 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 126 260 IPR024049 -
Lele45g0357 556 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 123 548 IPR004403 GO:0003747|GO:0006415
Lele45g0357 556 FunFam Peptide chain release factor subunit 1 399 556 - -
Lele45g0357 556 TIGRFAM aRF1/eRF1: peptide chain release factor 1, archaeal and eukaryotic forms 133 536 IPR004403 GO:0003747|GO:0006415
Lele45g0357 556 FunFam Eukaryotic peptide chain release factor subunit 1 122 255 - -
Lele45g0357 556 SMART eRF1_1_2 124 260 IPR005140 -
Lele45g0357 556 Gene3D - 399 556 IPR029064 -
Lele45g0357 556 Gene3D eRF1 domain 1 117 255 IPR024049 -
Lele45g0357 556 SUPERFAMILY Translational machinery components 262 396 - -
Lele45g0357 556 Pfam eRF1 domain 1 138 258 IPR005140 -
Lele45g0357 556 Pfam eRF1 domain 2 264 397 IPR005141 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0357 Lele-ChrLele45 2819894 2822955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0357 121 556 Eukaryotic Initiation Factors Gene Family AT3G26618 88.558 0.0 804