Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0345 ATGGATGAGTATCAAGAGATGGAGAGATTTGGTATGGATAATGATTTTGAAGGTGGTGAATGGATTGGTGGTGAGTTCTACTATCGAAAGCGCAAAGAGAAACGCACTCAAACCAGAGAAGATGTTCTTTTTGGGGTGTTTGCAGACTCTGATGATGATGAAGATGATTATTCGACCAGAAAACGTAGAAAAGATCGTGACTTATATAAGAAGCCTGACCTCACCAAGCCTGTGAATTTTGTCTCTACTGGAACTTTTATGCCTAATCAAGATGATAACCGTTCCAAAGAACAGATTGAAGAAGAAAATTATACTAGTGAGGACAGGCCAGGTTTAGGTCTTGGCATGGGAACTACTAGCACTTCTATTTCTGGGTTAGGTTTTAATACTAGTCATCGTGAAAGTGCTTCTGATGAAGATAATGGTGATGAAGATTTTCTTCCTACAGCATTTGGAAAGAAGATTAAGGAGGGAGCAATAAGAAGGGAGAGGGAAAGGGAGAGAGTAAAATTGGAAAAGAAGAGAGCTCAAGGAAAAATTCAAGCTCAAGATGAATTTCCAGATGTTGGGAAGTTTGAGAAGCATACAAAGGGGATCGGAATGAAGTTGTTGGAGAAGATGGGTTATAAAGGAGGTGGTCTTGGGAAGAATGAACAAGGTATTGTAGCTCCTGTTGAGGCTCATCTGAGGGCCAAGAATACAGGCATTGGATTTAATGACTTGAAGGGAACAACTCCTTTGCCAAGTGTGCAAGTTGAGAAGACAGCATTGCCTGGAGTTGCTCAACCTACAGCTGTTAGAGCAAAGGAAAGGTTGTGGTCAAAGCAATCAAGGTCAAAGAAGAAGAAAGATGAGGATGATTATATTACTGCTGAGGAATTGTTAGCAAGCAATCAAGAACAGGGTCTGGAGGTTGTTCAGAAGGTTTTTGATATGAGAGGGCCACAGGTTCGAATAATTACGAATTTGTCAGATTTGAATGCTGAGGAGAAAGCTAAGGAAAATGATATTCCAATGCCAGAGCTTCAGCATAACGTGGGTTTAATTGTTAGGTTGGCTGAAGCAGACATCCAAGAGATTGATAGAAAATTGAGGGGAGAGAGGGAGACAGCACTTAGCTTGAAAAAGGAAAAAGAGAAGTTAGAAACTGAGTCAGCTCACCAAGAAAAGCAGTTGCAAGATATGGAGGAAATAGAAAGTGTGCTGGCCCGAGTCGGAAAAGAGAATTCAATGGGGACATTGACATTGGATTTGCTTGCACAGTGCTTTGCTGACCTGCGGAAAAGATACGCTGATAGCTACAAGTTGTGTAACTTGTCATGTATTGCTAGCTCATATGCTTTGCCTTTGTTTATTAGAGTATTCCAAGGATGGGATCCACTTCAAAATCCATCACATGGGTTAGAGTTGGTGTCACGGTGGAAAACGTTGCTTCAAGAAGAAGATTGCCTTGATATCTGGGATGTGACTTCGCCTTATGCTCAATTGATTTCTGAAGTTGTATTACCAGCTGTCAGGATTTCAGGTATCAATACCTGGCAGGCACGGGATCCTGAGCCCATGTTACGGTTTTTGGAGTCATGGGAAAAGTTGCTTCCTTCTTCAGTTCTCACAACCATGTTGGATAATATAGTCATGCCAAAATTGGCCAGTGCTGTAGATACATGGGAACCACATCGTGAGACAATTCCGATTCATACTTGGGTGCACCCATGGTTACCTTTGTTAGGACACAAGTTAGAGGGCACATATCAGATTATACGCTTCAAATTGAGTACTGTTCTTGGTGCCTGGCACCCAAGCGATGGCTCTGCTTATGCTATATTGTCACCTTGGAAGACCGTATTTGATTCAGTGAGTTGGGAACAGCTTATGCTTCGATTTATTGTGCCAAAGTTGCAGCTTGTCCTGCAGGAGTTCCAAGTGAACCCAGCAGATCAGAAGCTTGATCAGTTTTATTGGGTGATGAATTGGGCTTCTGCTGTCCCAATTCATCTGATGGTTGATATAATGGAAAAGTTCTTCTTCACCAAGTGGCTTCAGGTTTTGTATCATTGGTTGTGCTCAAACCCTAACTTTGAAGAAGTTACAAAATGGTACTTGGGCTGGAAAGAACTTATTCCAAAGGAACTTTTGGCTAATGAAAGTATTCGATATCAGTTAAACCGCGGGCTTGATATGATGAACCAGGCTGTTGAAGGTATGGAGGTGGTCCAACCTGGCTTGAAAGAAAATATCAGCTATCTTAGGGTACTTGAGCAAAGGCAGTTTGAGGCTCAGCAGAAAGCAGCAGCTCATGCTCAAACCCAAGCTCCTTCAGGCTTGGGGGGTGCTGCCCATATCGATGGTGCTGCTGGTGTCCATGAGATGAGCTTAAAGGAAGTCATTGAGGCCCATGCCCAACAACATGGTTTGCTATTCAAGCTTAAACCTGGCAGAATGCACAATGGTCATCAAATATATGGATTTGGTAATGTCAGCATTATAATAGATTCTCTAAATCAAAAGGTATATGCCCAAACTGAGGATGCGTGGTCTTTGGAATCTCTCCAAGGCTTACTGGAGCTGCATAATAAATCCCTTGGTCGGAGACGATGA 2598 0.4242 MDEYQEMERFGMDNDFEGGEWIGGEFYYRKRKEKRTQTREDVLFGVFADSDDDEDDYSTRKRRKDRDLYKKPDLTKPVNFVSTGTFMPNQDDNRSKEQIEEENYTSEDRPGLGLGMGTTSTSISGLGFNTSHRESASDEDNGDEDFLPTAFGKKIKEGAIRRERERERVKLEKKRAQGKIQAQDEFPDVGKFEKHTKGIGMKLLEKMGYKGGGLGKNEQGIVAPVEAHLRAKNTGIGFNDLKGTTPLPSVQVEKTALPGVAQPTAVRAKERLWSKQSRSKKKKDEDDYITAEELLASNQEQGLEVVQKVFDMRGPQVRIITNLSDLNAEEKAKENDIPMPELQHNVGLIVRLAEADIQEIDRKLRGERETALSLKKEKEKLETESAHQEKQLQDMEEIESVLARVGKENSMGTLTLDLLAQCFADLRKRYADSYKLCNLSCIASSYALPLFIRVFQGWDPLQNPSHGLELVSRWKTLLQEEDCLDIWDVTSPYAQLISEVVLPAVRISGINTWQARDPEPMLRFLESWEKLLPSSVLTTMLDNIVMPKLASAVDTWEPHRETIPIHTWVHPWLPLLGHKLEGTYQIIRFKLSTVLGAWHPSDGSAYAILSPWKTVFDSVSWEQLMLRFIVPKLQLVLQEFQVNPADQKLDQFYWVMNWASAVPIHLMVDIMEKFFFTKWLQVLYHWLCSNPNFEEVTKWYLGWKELIPKELLANESIRYQLNRGLDMMNQAVEGMEVVQPGLKENISYLRVLEQRQFEAQQKAAAHAQTQAPSGLGGAAHIDGAAGVHEMSLKEVIEAHAQQHGLLFKLKPGRMHNGHQIYGFGNVSIIIDSLNQKVYAQTEDAWSLESLQGLLELHNKSLGRRR 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0345 865 Pfam Tuftelin interacting protein N terminal 6 104 IPR022159 -
Lele45g0345 865 Pfam GC-rich sequence DNA-binding factor-like protein 417 683 IPR022783 -
Lele45g0345 865 MobiDBLite consensus disorder prediction 93 107 - -
Lele45g0345 865 PIRSF TFIP11 1 860 IPR024933 -
Lele45g0345 865 Coils Coil 350 398 - -
Lele45g0345 865 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 1 852 IPR045211 GO:0000390
Lele45g0345 865 MobiDBLite consensus disorder prediction 268 287 - -
Lele45g0345 865 MobiDBLite consensus disorder prediction 271 287 - -
Lele45g0345 865 SMART G-patch_5 194 239 IPR000467 GO:0003676
Lele45g0345 865 MobiDBLite consensus disorder prediction 47 150 - -
Lele45g0345 865 MobiDBLite consensus disorder prediction 78 92 - -
Lele45g0345 865 ProSiteProfiles G-patch domain profile. 196 241 IPR000467 GO:0003676
Lele45g0345 865 MobiDBLite consensus disorder prediction 54 73 - -
Lele45g0345 865 MobiDBLite consensus disorder prediction 115 132 - -
Lele45g0345 865 Pfam G-patch domain 196 237 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0345 Lele-ChrLele45 2745066 2747663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0345 196 237 C2H2 Transcription Factor Family AT5G26610 47.619 3.18e-07 51.2