Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0333 ATGCCGCTTTCACTAACCCCTCAAGTAATCACCTGCAAAGCTGCGGTGGCATATGGAGCTGGAGAGCCGTTGGTAGTGGAGGAAGTTGAAGTGAGCCCTCCGCAACCTTCGGAGATTCGGATTAAAGTTGTCTCCACCTCTCTCTGTCGCAGCGATCTCTCTGCTTGGGAATCGCAAACCATATTTCCTCGAATATTTGGCCATGAAGCGGCAGGGATTGTTGAGAGTGTGGGCGAGGGAGTGACTGAATTCAGGGAGGGAGACCATGTGTTAACTGTCTTCATTGGAGAATGCATGACTTGCAGGCTGTGCAAATCTGGAAAAACAAACATATGTCAAGTTCTGGGATTGGAAAGAAGAGGTTTAATGCATAGTGATAAGAAGACACGTTTCACAGTAAAAGGGAAGTCTATTTATCACTATTGTGCTGTTTCAAGTTTCAGTGAATATACAGTAGTGCATTCTGGGTGTGCGGTCAAAGTCAGCCCAAATGCTCCTCTTGAGAAAATATGCCTATTGAGCTGCGGTGTTGCTGCAGGTCTGGGTGCTGCATGGAATGTTGCTAATGTATCAGAAGGATCAACTGTGGTGATATTTGGACTTGGAACTGTCGGCCTTTCTGTTGCACAAGGTGCTAAACTTAGAGGGGCATCTCGAATAATCGGTGTGGACAACAACCCTTTGAAGTGTGAAAATGCTAAAGCTTTTGGAGTTACTGAAGCTGTTAACCCAAATTCCTTTGATGAACCTATCGCTCAGGTTATTAAGCGCATTTCCAATGGTGGAGCTGATTTCTCTTTCGAATGCGTAGGTGATACCGATATGATAACCACTGCATTGCAGTCATGCTGTGATGTAATACTCTATACCTATATAACTAAAGATCTTGTTTTGTTATTATCAGTCTTTTTATACAATGAACTTGAATTTATACCACAATTACATTGCATCTTTCCTTCTTCCTCACAGGGATGGGGTTTGACTGTTACCCTTGGTGTGCCAAAAGTGAAGCCTGAGATGTCAGCTCATTATGGACTATTATTAATGGGAAGAACATTGAAAGGATCTTTGTATGGAGGATGGAAACCCAAATCTGATTTGCCTTCATTGGTAGACAAGTATGTGAATAAGGAAATCCAGATTGATGATTACATAACACACGATTTGCCATTTGAGGACATTAACAAAGCTTTCAATCTCATGAGAGAAGGAAAGTGTCTGCGTTGTGTTATCCACATGCCCAGGCTCAACTCAAAATGA 1260 0.427 MPLSLTPQVITCKAAVAYGAGEPLVVEEVEVSPPQPSEIRIKVVSTSLCRSDLSAWESQTIFPRIFGHEAAGIVESVGEGVTEFREGDHVLTVFIGECMTCRLCKSGKTNICQVLGLERRGLMHSDKKTRFTVKGKSIYHYCAVSSFSEYTVVHSGCAVKVSPNAPLEKICLLSCGVAAGLGAAWNVANVSEGSTVVIFGLGTVGLSVAQGAKLRGASRIIGVDNNPLKCENAKAFGVTEAVNPNSFDEPIAQVIKRISNGGADFSFECVGDTDMITTALQSCCDVILYTYITKDLVLLLSVFLYNELEFIPQLHCIFPSSSQGWGLTVTLGVPKVKPEMSAHYGLLLMGRTLKGSLYGGWKPKSDLPSLVDKYVNKEIQIDDYITHDLPFEDINKAFNLMREGKCLRCVIHMPRLNSK 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0333 419 Gene3D - 15 408 - -
Lele45g0333 419 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 166 377 IPR036291 -
Lele45g0333 419 FunFam S-(hydroxymethyl)glutathione dehydrogenase 180 292 - -
Lele45g0333 419 Pfam Zinc-binding dehydrogenase 204 283 IPR013149 -
Lele45g0333 419 FunFam Alcohol dehydrogenase 6 15 193 - -
Lele45g0333 419 Pfam Alcohol dehydrogenase GroES-like domain 37 160 IPR013154 -
Lele45g0333 419 Gene3D - 180 356 - -
Lele45g0333 419 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Lele45g0333 419 SUPERFAMILY GroES-like 364 412 IPR011032 -
Lele45g0333 419 PANTHER ALCOHOL DEHYDROGENASE 8 411 - -
Lele45g0333 419 SUPERFAMILY GroES-like 7 185 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0333 Lele-ChrLele45 2692099 2695395 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0333 38 175 Monolignol Biosynthesis Gene Families AT4G37980 26.761 5.97e-10 58.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0333 45 2692099 2695395 Lele45g0333 45 2692099 2695395 ECH
Lele45g0333 45 2692099 2695395 Lele48g1124 48 15892957 15897880 hybridization