LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele45g0325	ATGGAGATAGAGGCGAGCAGGGTGGTCGGGAATAATGGGACGACGGCGATGCCGGCGCTGAGTCCTCTCAGCGAGACGCTGTGGAGGGAGACTAAGGAAAACGTCGACTTCGTCGGAGATGTGTCGGCTAGGCTCACCTGGAAGGATCTCACCGTCATGGTCACTCTAGGCAACGGAGAGACCCAGAACGTTCTCGAAGGTCTCACCGGCTACGCCGAGCCCGGCACCTTCACCTCTCTCATGGGCCCCTCCGGCTCCGGCAAATCCACTCTCCTCGACGCCCTCTCTAGCCGTCTCGCTGCTAATGCCTTCCTCTCCGGATCCATCCTCCTCAATGGTCGCAAAGCCAAGCTCTCTTTTGGCACCGCTGCATATGTGACGCAAGACGACAACCTCATAGGAACATTGACTGTACGAGAAACCATATCGTACTCGGCTCGTCTGAGGCTACCGGATAAGATGCCATGGTCGGACAAGCGAGCTCTGGTGGAGAGCACAATAATAGCCATGGGGCTTCAGGATTGTGCCGACACAGTGATCGGAAACTGGCATCTCCGGGGAATCAGTGGTGGAGAGAAGAGAAGAGTTAGCATTGCTTTGGAGATCTTGATGAGGCCCAGGTTGCTCTTTCTTGATGAACCTACAAGTGGACTCGACAGTGCTTCGGCTTTCTTTGTGACTCAAACACTACGAGCTCTTGCAAGGGATGGTAGAACAGTGATAGCTTCAATTCACCAACCAAGCAGTGAAGTGTTTGAACTATTTGACCAATTGTACCTTCTTTCTGGCGGCAAAACTGTTTACTTTGGCCAAGCTTCTGAAGCTTACGAGTTCTTTGCACAAGCAGCCTTTCCATGCCCTGCATTGAGGAACCCTTCTGACCATTTCCTTAGATGCATCAACTCTGACTTTGACAAAGTCAAGGCCACTCTCAAAGGCTCCATGAAACTCAGGTTTGAAGCAAGTGATGATCCTTTGGACAAGATAACTACAGCTGAAGCTATACGGACTCTGATAGGTTATTATCGGACTTCTCAGTACTCTTATGCTGCAACACAGAAAGTGGATGAGATATCGAAAGTGAAAGGAACAGTGCTAGATTCAGGAGGAAGTCAGGCGAGCTTCTTCATGCAGGCATTTACATTAACGAAGAGATCATTCATCAACATGTCAAGGGATTTTGGATATTACTGGCTTCGTCTTGTCATCTATATTGTTGTCACTGTCTGCATCGGAACCATCTATCTCAACGTTGGAACTGGCTACAACTCCATTCTGGCAAGAGGTTCATGTGCGTCGTTTGTGTTTGGGTTTGTGACATTCATGTCAATTGGAGGGTTCCCTTCATTTGTGGAAGACATGAAGGTATTCCAAAGGGAGAGGCTGAATGGTCACTATGGAGTGGCATCGTTTGTGATAAGCAACACGTTATCTGCAATGCCGTTTCTGATACTCATAACGTTTCTGTCTGGAACCATTTGTTACTTCATGGTTCGTCTCCACCCTGGCTTCTGGCACTACCTCTTCTTCGTCTTGTGCCTCTATGCCAGTGTCACTGTCGTTGAGAGCTTGATGATGGCCATTGCTAGTATTGTCCCCAACTTCCTCATGGGTATCATCATCGGAGCGGGCATTCAGGGCATATTCATGTTGGTGTCTGGCTACTTTAGGCTCCCACATGACATACCAAAGCCATTCTGGCGCTACCCAATGTCTTATATCAGTTTCCACTTCTGGGCATTACAGGGTCAATACCAAAATGATCTGAAAGGGTTGATCTTTGACAACCAGACGCCGGATCTTCCCAAGATTCCGGGGGAGTACATACTGGAGAACGTGTTCCAGATTGATGTAAACAGATCAAAGTGGATTGATTTGATAGTGATATTCAGCATGATCATCATATACAGAATCATCTTCTTCATAATGATCAAGATCAACGAGGATGTGACTCCATGGGTGAGAGGTTACATTGCCAGGAGATCAATGCAGCAGAAGAGTGCAACACAGAACACCACCATTGCTCCTGATGTTCTCACTCAATCTCCTTCTCTACGAACCTATATCACAAGCCAATCCAGTTCCGGTGCTCAGAAAAGGTAA	2103	0.4807	MEIEASRVVGNNGTTAMPALSPLSETLWRETKENVDFVGDVSARLTWKDLTVMVTLGNGETQNVLEGLTGYAEPGTFTSLMGPSGSGKSTLLDALSSRLAANAFLSGSILLNGRKAKLSFGTAAYVTQDDNLIGTLTVRETISYSARLRLPDKMPWSDKRALVESTIIAMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPSSEVFELFDQLYLLSGGKTVYFGQASEAYEFFAQAAFPCPALRNPSDHFLRCINSDFDKVKATLKGSMKLRFEASDDPLDKITTAEAIRTLIGYYRTSQYSYAATQKVDEISKVKGTVLDSGGSQASFFMQAFTLTKRSFINMSRDFGYYWLRLVIYIVVTVCIGTIYLNVGTGYNSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVASFVISNTLSAMPFLILITFLSGTICYFMVRLHPGFWHYLFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGYFRLPHDIPKPFWRYPMSYISFHFWALQGQYQNDLKGLIFDNQTPDLPKIPGEYILENVFQIDVNRSKWIDLIVIFSMIIIYRIIFFIMIKINEDVTPWVRGYIARRSMQQKSATQNTTIAPDVLTQSPSLRTYITSQSSSGAQKR	700

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele45g0325	700	SMART	AAA_5	74	245	IPR003593	-
	Lele45g0325	700	Gene3D	-	39	284	IPR027417	-
	Lele45g0325	700	Pfam	ABC-2 type transporter	378	584	IPR013525	GO:0016020\|GO:0140359
	Lele45g0325	700	Pfam	ABC transporter	67	216	IPR003439	GO:0005524
	Lele45g0325	700	Pfam	ABC-2 type transporter	245	301	IPR043926	GO:0140359
	Lele45g0325	700	PANTHER	ABC TRANSPORTER G FAMILY MEMBER 11	33	667	-	-
	Lele45g0325	700	FunFam	ABC transporter G family member 11	39	282	-	-
	Lele45g0325	700	ProSiteProfiles	ATP-binding cassette, ABC transporter-type domain profile.	45	288	IPR003439	GO:0005524
	Lele45g0325	700	CDD	ABCG_EPDR	42	270	-	-
	Lele45g0325	700	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	45	280	IPR027417	-
	Lele45g0325	700	ProSitePatterns	ABC transporters family signature.	188	202	IPR017871	GO:0005524\|GO:0016887

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele45g0325	Lele-ChrLele45	2624549	2629742	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele45g0325	75	276	Calmodulin-binding Proteins	AT2G36910	30.986	3.43e-11	65.1