Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0297 ATGATAGCGCCAAGAAAAAAAGCGGAATTTTTTGGGTTCTTTTGGCTGGTTCTTGACGTTCTGGATTATTCAACATCCAAAAGCACAAAAGGAATAAAAACTAGAAGCAACTCTAGCAAAGGAACTGAAGAGAAATTGTCTGATTACAAGGTTGGCACTCTCCCAACTGTTCTATACATCCCCAACTTCATGACACATAATGAAGAGAATTTTCTTCTCGATAATATATATGGACCTCCTCCGTCAAAGTGGAAGTCATTGAAGAATAAAAGGCTACAGAATTGGGGCATGTTTACTTTCGCCGTAAATGAAGCTGAGGCTTTGAAACACAATGAATTAGATAACCCCTTTTCAAGCTCAGAGGAAGCAGTGAGAAGAAGAGAGTATAAGAATGTACATAGGACATCCAATAGAATTTCACCAACTTTGTCTGCTCTAGCTAAGGTTCTCCCCGATCCTGCGCTCAGATTCACAATTCGTCAGCCTCTTCTCCTCTCTCTTCTTTCTCGTTTCTTCGGTTGTCTTTCGCAGTTTCTTCTTCAAATATCAAATTCAGCAGTTGATTTCGGATTTGTCCCTTCATATATCTTCCTCATATATCCGCGGTTCCACAGTACTGCTATTCTGAAGCTTCGTTTTCATATCGGATCTATTGGAGGCAAATTATGCTTTGAGGGGATGAAGAAAGTCTCAGATGTGGATACTGAGAAGTCTGAGAAAACTAGCTTCAAGGTTGTATTTGACAAGTTGGTGAAGGAACTTCGGGAACCTGTAGACTTTGAACTTCCAGATTGGTTTAATAAGTGGAAGTCAATGCGCTTCACCTCTATAAAACGAAATATATATCACACGAAGAAGGTCAGGAAACGACTTGATGATGATGATGGAATTTTCTGTTCCTGTACTCCCTCAGCTGGATCATCTAGTGATGCTGTTTTCTACTTGCTCTTCAGGCTGCAAATGTGGGAGCTCCTGTCTGAACAAACCATTCCAGAGTCGACCTGTAAAGAAGATGAAACTGGTCGAGAGAAATGTGGTTCAGGAATTGTGGCGGATGAGGATATTGAACAAGGGGAGTTTGTGATAGAATATGTAGGAGAAGTCATTGATGACAAAGAATGTGAACGTAGGCTTTGGAATATGAAACATCGAGGGGAGAAAAACTTCTACTTATGTGAAATCAATCGAGATATGGTGATTGATGCAACGATAATTGATGGTGACACGAGAGTTGGCATATTTGCAACTCGTGACATTAAAAAGGGGGAACATCTGACATATGATTACCAGTACGAGCAATTGCCTCATTCTTTAATTGCATTTTTACAGTTGAGGATTGCCTCAGATAATTTGATGGCCATTATGGTGGATGCTAAATATATAGCAGGTTTGTTCAGTTTGGTGCAGATCAAGATTGTCATTGTGGTGCTGTTACATGCAGGCTCGCAATGGTACAGTGTGGATTTGGGTGTAACTAAAGGTTTTGGCATGGATGAACATGTTTATCAAAATGGAGGCTTGCATGCAGGAAGTTCTGATGTTGTTGGCCAACAAAAGTGCTCGGACAATTGCATTGGTCAAGTTGTTAGGATAAATGACAGGTTTGGGATTATTAGGCGGTTTGATAAATATTCCAAAAAGCATTTGATCATGTTTGAGGATGGTACTGTCCGTTTTCTTGACATGTCAGAAGAAGACTGGGAATTTGTGACACTGTGA 1719 0.4026 MIAPRKKAEFFGFFWLVLDVLDYSTSKSTKGIKTRSNSSKGTEEKLSDYKVGTLPTVLYIPNFMTHNEENFLLDNIYGPPPSKWKSLKNKRLQNWGMFTFAVNEAEALKHNELDNPFSSSEEAVRRREYKNVHRTSNRISPTLSALAKVLPDPALRFTIRQPLLLSLLSRFFGCLSQFLLQISNSAVDFGFVPSYIFLIYPRFHSTAILKLRFHIGSIGGKLCFEGMKKVSDVDTEKSEKTSFKVVFDKLVKELREPVDFELPDWFNKWKSMRFTSIKRNIYHTKKVRKRLDDDDGIFCSCTPSAGSSSDAVFYLLFRLQMWELLSEQTIPESTCKEDETGREKCGSGIVADEDIEQGEFVIEYVGEVIDDKECERRLWNMKHRGEKNFYLCEINRDMVIDATIIDGDTRVGIFATRDIKKGEHLTYDYQYEQLPHSLIAFLQLRIASDNLMAIMVDAKYIAGLFSLVQIKIVIVVLLHAGSQWYSVDLGVTKGFGMDEHVYQNGGLHAGSSDVVGQQKCSDNCIGQVVRINDRFGIIRRFDKYSKKHLIMFEDGTVRFLDMSEEDWEFVTL 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0297 572 Pfam SET domain 406 429 IPR001214 GO:0005515
Lele45g0297 572 Gene3D SET domain 405 436 IPR046341 -
Lele45g0297 572 SMART set_7 336 436 IPR001214 GO:0005515
Lele45g0297 572 PANTHER SET DOMAIN PROTEINS 230 434 - -
Lele45g0297 572 ProSiteProfiles SET domain profile. 331 430 IPR001214 GO:0005515
Lele45g0297 572 SUPERFAMILY SET domain 267 433 IPR046341 -
Lele45g0297 572 Gene3D SET domain 271 404 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0297 Lele-ChrLele45 2384533 2397818 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele45g0297 SET 0.00011 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0297 45 2384533 2397818 Lele05g1994 05 14185562 14194101 CCT
Lele45g0297 45 2384533 2397818 Lele06g1831 06 12854514 12862562 CCT
Lele45g0297 45 2384533 2397818 Lele07g2040 07 13654657 13662914 CCT
Lele45g0297 45 2384533 2397818 Lele08g1832 08 12711766 12719818 CCT
Lele45g0297 45 2384533 2397818 Lele47g1090 47 16578823 16582797 hybridization