Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0274 ATGTTGCGCTTTTTACTGCGGCTTCTGGAGTACCTGCTGGGCATCGAAGTGAAACCTGGAAAACCATATCCATATCACGCGGACAATGTGCAAGGGAAGCTTCACGTAACTCAGGCAACCTTAGGCCTTGGCTCATCAACTGAGAAAAGCATTCTCCAATGTTCTGCTGGACATAAAAATCCAGTCTTTTTGTGCTCATTGCTGCCAAATAATACTGAGTCATGCCCTTTGAATCTTGAGTTTGATGAAGATGATTTATTGGCCTTCTCAGTAATTGGTCCACGAAGTATCCATCTCTCTGGTTTTTTTGAGACTGCTGATGGGGATGAACTTAGGGATGACTATGAGTATGATTCTTTTGGAGAGGATATTGCTGATACAGAGACAGATGAGTCTTCTGAATACAACACTGAAGATGAATATGCGGATGGCTTCATTGATGATAGTGATATTGACAGTTATCCACCTTCACCTGTCCCAAATAGTGGAGTTGTAATTGAGGAAATAGTAGATGATGATAGGCCTGAAAGTGGAGATATTGCTTCCAAGAAGTCGAAGAAGATTCAAATGCCCAACTCTAAGGGCGGCAAAAATTCTCAGCAGCAAATTGTTGTTAGAGGTGATAAGAGTGTCCCAGTTTTGGAAAGTGAAGATGAAGATGGTTTTCCAATTTCTGCTTCTCCAAAGGCAGAAGCAAAAGAAGAAAAGACACATAAGAAAACTGAGAAAGCCAATAAAAAGAAAGTGAAAGATGATGATGCTGCTGCAACATTGAAACGAAAAGGTGAAGGTGCTGACAAAGATGAGCATCAAGAAGGGAAAAAGATAAAGAAAAAGAAGTTGAAAGAACAAGGTAAAGGGGACAGTGCAAAAGTATCAGGTGATAGCAATGAGACTCATGATGCTAGTGAAGATGGTAAGCGTCCCGAGGAAGTGAAAATAACACCCAGCCTTGATCATGTTTCTCATGCTGAGGATGAGGATCAAGGAAATGTATCCAATGAAAAAATCCTTGATGAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGACTAAGGATGAAGGGGTAACTAATGCGAATCAAACTTCCTCAGATATGGGAAATCGGAATATATCCACTTCTGAGAGAGGAGAGGAGGAAAAAGAAGCCAAGCCATCTCAAATAAGAACCTTCCCAAATGGGTTAGTTGTTGAGGAACTATCCATGGGTAAACCAGATGGCAAAAGAGCTACTGCTGGAAAACAGGTCAGTGTTAGATACATTGGCAAACTACAGAAAAATGGGAAAATATTTGACTCGAATATTGGAAGAGCGCCCTTTAAATTTCGTCTTGGTATTGGGCAAGTCATAAAGGGTTGGGACGTTGGGATCAATGGTATGAGAATTGGGGACAAAAGAAGAATCACAATTCCACCATCAATGGGTTACGGAGATAAACGTGCTGGGAGTATACCTCCAAATTCTTGGCTTGTATTTGATGTTGAGTTGATCGATGTTCGCTGA 1506 0.4084 MLRFLLRLLEYLLGIEVKPGKPYPYHADNVQGKLHVTQATLGLGSSTEKSILQCSAGHKNPVFLCSLLPNNTESCPLNLEFDEDDLLAFSVIGPRSIHLSGFFETADGDELRDDYEYDSFGEDIADTETDESSEYNTEDEYADGFIDDSDIDSYPPSPVPNSGVVIEEIVDDDRPESGDIASKKSKKIQMPNSKGGKNSQQQIVVRGDKSVPVLESEDEDGFPISASPKAEAKEEKTHKKTEKANKKKVKDDDAAATLKRKGEGADKDEHQEGKKIKKKKLKEQGKGDSAKVSGDSNETHDASEDGKRPEEVKITPSLDHVSHAEDEDQGNVSNEKILDEKKKKKKKKKKKTKDEGVTNANQTSSDMGNRNISTSERGEEEKEAKPSQIRTFPNGLVVEELSMGKPDGKRATAGKQVSVRYIGKLQKNGKIFDSNIGRAPFKFRLGIGQVIKGWDVGINGMRIGDKRRITIPPSMGYGDKRAGSIPPNSWLVFDVELIDVR 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0274 501 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 50 500 - -
Lele45g0274 501 MobiDBLite consensus disorder prediction 169 183 - -
Lele45g0274 501 FunFam Peptidyl-prolyl cis-trans isomerase 390 501 - -
Lele45g0274 501 MobiDBLite consensus disorder prediction 169 392 - -
Lele45g0274 501 MobiDBLite consensus disorder prediction 186 206 - -
Lele45g0274 501 MobiDBLite consensus disorder prediction 144 163 - -
Lele45g0274 501 Pfam Nucleoplasmin-like domain 14 103 IPR041232 -
Lele45g0274 501 MobiDBLite consensus disorder prediction 357 372 - -
Lele45g0274 501 SUPERFAMILY FKBP-like 365 500 - -
Lele45g0274 501 Gene3D - 360 501 IPR046357 GO:0003755
Lele45g0274 501 Coils Coil 334 354 - -
Lele45g0274 501 MobiDBLite consensus disorder prediction 229 340 - -
Lele45g0274 501 PIRSF FK506-bp_FPR3 251 501 IPR023566 GO:0003755
Lele45g0274 501 PIRSF FK506-bp_FPR3 55 292 IPR023566 GO:0003755
Lele45g0274 501 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 409 498 IPR001179 GO:0003755
Lele45g0274 501 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 414 501 IPR001179 GO:0003755
Lele45g0274 501 Gene3D Nucleoplasmin core domain 8 109 - -
Lele45g0274 501 MobiDBLite consensus disorder prediction 373 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0274 Lele-ChrLele45 2234405 2241045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0274 414 501 Calmodulin-binding Proteins AT5G48570 51.111 7.15e-18 84.7