Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0252 ATGTTATTTCAGTGGGTTTTCGTGAGTCTTCTGTCTGTCAAATGTTTGACTAATTGCTTCATTGAAAGTTCTGTCCTTTTCTTCTGTCGTTTTCTTCTGTTGAAATCATATCTAATTACAGTCCTTGCCTTAGATGGCATGTATGCATTAAATACGGTCCTGGTTCTTTACGCCGCCCAATTGTACTATTACTTGTGCATTTATAGCTATCTGATTGTTTTCATTGCTTCCCCTTCAGTGGGTTTTCTACTGCAACACTCTTCTTCCCTTTCCTCTGTTTCTTCTTCATCTTCCTCTACTTCTTCTTCTTCTGGGTTATTGAATATAGATACAGAAAAAGAGCATATTATATTATATAGAGTACTAAATCAACCTGGTAATGAGGGGGTGAAGATGGGGAGGTCACCATGTTGTGATAAAGATGGAGTGAAAAAGGGAGTTTGGACTCCTGAAGAAGATGAACTCTTAGTTCAGTACATCAAGAAGCATGGCTGTGGTAATTGGCGTACACTACCCAAGAACGCAGGTCTACTTCGATGTGGAAAAAGTTGTCGGCTTCGGTGGATAAACTATCTTCGCCCTGACATCAAGCGTGGCCCGTTTACTAGTGAAGAAGAAGGTAAAATTATTCAACTTCATGGCATGCTCGGCAACAGGTGGGCTGCTATAGCATCTCATTTACCAGGAAGAACAGACAATGAAATTAAGAACTATTGGAACACTCATCTGAAGAAGCGCTTCATTCACTCAGGTCATTCTCTGGAGTCACAAGAGCCATCTTTTGGTCCTCATCGTCAAAGTGATATGAAATATGAATCTTCATCTGTACGTCATGTAATCCAGTGGGAAAATGCCAGAGTTGAGGCAGAGAAAAGGCTGTCAATGGAATTGGAATCCTCTTGTCTTAATCATTGTTCCCAAACTAACACACATTCTGACTGCTTTCTCCGACTTTGGCACTCCGAGGTAGGGCAATCGTTTCGCATGATCAGAGAAAAGAAAGCGGAAAGCGAAAGCCCTACCTCGCAAGCGAGCAGTGTCTTTGCCAACATGGCTCAAGAACAAGCAAGCAGCTGCAATCCAAAGCTTGAAGAAGGCACAGCTGGGTCAGACTCAGGTTCTCACGAATTTCTTGATGCCTCTGATTCTGCATTGAAGCTCCTGCTAGATATGCCTCATGACAATGTGGGATTCTTTGAAGGATTGGAACAGACCGAGAATTTCCAGGGTCCTCTGCATGATAGATATGACTGA 1254 0.4242 MLFQWVFVSLLSVKCLTNCFIESSVLFFCRFLLLKSYLITVLALDGMYALNTVLVLYAAQLYYYLCIYSYLIVFIASPSVGFLLQHSSSLSSVSSSSSSTSSSSGLLNIDTEKEHIILYRVLNQPGNEGVKMGRSPCCDKDGVKKGVWTPEEDELLVQYIKKHGCGNWRTLPKNAGLLRCGKSCRLRWINYLRPDIKRGPFTSEEEGKIIQLHGMLGNRWAAIASHLPGRTDNEIKNYWNTHLKKRFIHSGHSLESQEPSFGPHRQSDMKYESSSVRHVIQWENARVEAEKRLSMELESSCLNHCSQTNTHSDCFLRLWHSEVGQSFRMIREKKAESESPTSQASSVFANMAQEQASSCNPKLEEGTAGSDSGSHEFLDASDSALKLLLDMPHDNVGFFEGLEQTENFQGPLHDRYD 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0252 417 SMART sant 197 245 IPR001005 -
Lele45g0252 417 SMART sant 144 194 IPR001005 -
Lele45g0252 417 MobiDBLite consensus disorder prediction 352 367 - -
Lele45g0252 417 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 132 345 - -
Lele45g0252 417 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 193 247 IPR017930 -
Lele45g0252 417 CDD SANT 148 192 IPR001005 -
Lele45g0252 417 Gene3D - 200 246 - -
Lele45g0252 417 FunFam Myb transcription factor 142 198 - -
Lele45g0252 417 Pfam Myb-like DNA-binding domain 198 243 IPR001005 -
Lele45g0252 417 Pfam Myb-like DNA-binding domain 145 192 IPR001005 -
Lele45g0252 417 Gene3D - 145 197 - -
Lele45g0252 417 CDD SANT 200 243 IPR001005 -
Lele45g0252 417 ProSiteProfiles Myb-like domain profile. 140 192 IPR001005 -
Lele45g0252 417 MobiDBLite consensus disorder prediction 352 375 - -
Lele45g0252 417 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 192 IPR017930 -
Lele45g0252 417 ProSiteProfiles Myb-like domain profile. 193 243 IPR001005 -
Lele45g0252 417 SUPERFAMILY Homeodomain-like 142 239 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0252 Lele-ChrLele45 2066926 2069839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0252 132 400 MYB Transcription Factor Family AT3G61250 54.093 2.21e-94 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele45g0252 Myb_DNA-binding 1.1e-15 CL0123