Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0251 ATGGGGAGGCAGCCAGGTGATAAGGCAAAACCTAAACACAGAAAAGGGTTATGGTCACCTGAGGAGGACAATAAACTCAGAAACTATATCATCAAGCATGGCCATGGCTGCTGGAGCTCTGTTCCCATCAACGCAGGGTTGCAGAGGAATGGGAAGAGTTGCAGATTAAGGTGGATCAATTATCTAAGGCCAGGATTGAAGAGAGGGATGTTCAGCAAACATGAGGAGGAGACAATCTTGACCCTTCATCACATGTTAGGCAACAAGTGGTCTCAGATTGCACAGCATTTACCAGGAAGGACAGATAATGAGATAAAGAACCACTGGCATTCATATTTGAAAAAGAAAGTGACCAAAGCAGAGGAAATACAATCTCATAATAATAATCATAAACAAATGCAGTATGCTAGCTCAAGCTCAGATACCTTTGATTCTTCTTCATCATCAACAGGTCAAAAACCAGCAATAATTCCAATCTCTGATCACTTCTCTTCTTTCCAAAACTACAACTTCGTCAAAGAGTCTACTCACAGCTCCTTACCAAAACTTCTATTCGCCGAGTGGCTCTCGCTAGATCAAGCAAACTGCGCGATCCCTTCAAATTCAAGTGATGACCCTTTTGTGTTTGGAAATGGAAGTTTTGATCAGTACTCAGATTTCCATGAAGCTGCAATTCATAATGGTGTATCAGAAGGAGGAAGCTATGGTGGAGAGTTTCATAACGGTCTAACAAACCCAAATGTTACTGAAGTCTTCAATGTACAGTTCAAAATAGCAAATCAAATTGCAGAAAATAATGGGGTCATTCATTTCCCAAGTTTCAGCATGAACAATGATGAAATAGTTGCTTCTGCATACACACCTATGGAATCTTTGTTTCAGATTACAGAGTCAACACCTTGTGGTTTTATTTCAATGATGTTTTCTGCAAATCTTGTACATCTCCGAGTTGATTTATGTATTGTCCATGATGTTATGAAAGGACTTGGTGACAAGGGACAACTTTAA 1008 0.3998 MGRQPGDKAKPKHRKGLWSPEEDNKLRNYIIKHGHGCWSSVPINAGLQRNGKSCRLRWINYLRPGLKRGMFSKHEEETILTLHHMLGNKWSQIAQHLPGRTDNEIKNHWHSYLKKKVTKAEEIQSHNNNHKQMQYASSSSDTFDSSSSSTGQKPAIIPISDHFSSFQNYNFVKESTHSSLPKLLFAEWLSLDQANCAIPSNSSDDPFVFGNGSFDQYSDFHEAAIHNGVSEGGSYGGEFHNGLTNPNVTEVFNVQFKIANQIAENNGVIHFPSFSMNNDEIVASAYTPMESLFQITESTPCGFISMMFSANLVHLRVDLCIVHDVMKGLGDKGQL 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0251 335 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Lele45g0251 335 SMART sant 67 115 IPR001005 -
Lele45g0251 335 SMART sant 14 64 IPR001005 -
Lele45g0251 335 CDD SANT 71 113 IPR001005 -
Lele45g0251 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Lele45g0251 335 Gene3D - 15 67 - -
Lele45g0251 335 CDD SANT 18 62 IPR001005 -
Lele45g0251 335 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Lele45g0251 335 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Lele45g0251 335 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Lele45g0251 335 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Lele45g0251 335 FunFam MYB transcription factor 70 145 - -
Lele45g0251 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Lele45g0251 335 MobiDBLite consensus disorder prediction 132 154 - -
Lele45g0251 335 Gene3D - 70 141 - -
Lele45g0251 335 PANTHER MYB DOMAIN PROTEIN 55 1 230 - -
Lele45g0251 335 FunFam MYB transcription factor 12 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0251 Lele-ChrLele45 2061327 2064023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0251 6 190 MYB Transcription Factor Family AT5G52260 55.000 2.23e-64 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele45g0251 Myb_DNA-binding 3.3e-12 CL0123