Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0225 ATGGGTTCGACTCGAGACACAGATTACCCCGACCCATGTCAACGACGAGGAAGCGAACCTCTTTGCGACGCAATTGGCCAAGCCTCCATGCTTTCCATGATTCTGAAATCAGCTCTCGAGCTGGATTTGCTCGAGATCATCGCCAAGGCTGGCCCTAATGCTGAGCTTTCCCCCTCCGAAATTGCCGCTCAGCTTCCGACCAAGAACCCGGACGCCGCCGTGATGCTCGACCGCATGATGCGGCTATTGGCCTGCTACAACGTACTGAGCTGCTCGGTCCGGACCCTTCCCGACGGCAAGATCGAGAGGCTCCTTGGGCTGGCCCCCGTCCTAATTACTTGGTCAAGAACGAAGATGGCGTTTCTATCGCTTCTCTCAACCTCATGA 387 0.5633 MGSTRDTDYPDPCQRRGSEPLCDAIGQASMLSMILKSALELDLLEIIAKAGPNAELSPSEIAAQLPTKNPDAAVMLDRMMRLLACYNVLSCSVRTLPDGKIERLLGLAPVLITWSRTKMAFLSLLSTS 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0225 128 SUPERFAMILY "Winged helix" DNA-binding domain 28 110 IPR036390 -
Lele45g0225 128 Pfam Dimerisation domain 33 84 IPR012967 GO:0046983
Lele45g0225 128 Gene3D - 21 111 IPR036388 -
Lele45g0225 128 FunFam Caffeic acid 3-O-methyltransferase 14 112 - -
Lele45g0225 128 PANTHER O-METHYLTRANSFERASE 28 108 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0225 Lele-ChrLele45 1902448 1902834 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0225 1 110 Monolignol Biosynthesis Gene Families AT5G54160 54.464 2.26e-27 102