LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele45g0223	ATGTTCTTCAATTTCTGGTATACAGTTGCAACTGCAACAAGTGGTCATGAAGCTTTGGAAACTCTGAGGGAATTCAGAGGCTTCTTCGACCTCGTCATCACCGACCTCAACATGCAAGGAATGAATGGATTTGAGCTCCAAAAGCGCGTCAAAAGCGAATTCCATCTCCCAGTCATCATTATGTCTGCGGATAGGAGGAAGAGTGTGATGTCGAAGAGTTTAGAGCAAGGAGCAGCATTTTGCTTAGTGAAACCAGTTCGAAGAGAGGACTTGAGAGATGTGTGGCAGTATGCTGTGGCTGGGAGGAGAGAGAAACTGAGAGTTGAGAATGGCAGAATAGTATCAGTAAGAGACGAAGAAGAAGGAGAAGGAGACTCAGCATCATCACCAGGTGGCATTAATAATATAGCCTCTACACAGAATTCAATATCGCCTAATAAAAAGCAAAGGAAGAAGTTTTGCAAGAGAAATCGTAGCCAGGTGGCTGAGAATGAAGGACTTGTATTCAGTGGTCCAAAGAGGTCCAAGATTTGCTGGACTGTTGAACTTAACAGTCGCTTCTTGTTGGCCTTAAGGCACCTTGGCATGGACAAGGCTGTTCCAACCAAGATTCTTGAGATCATGAACGTGCCAGGTTTGACCAGAGAAAATGTTGCCAGTCATTTGCAGAAGTATCGTTTGTTTCTGAAGAGAATTGCTGAGAAAGGAATCCTTGAGGGATTACCTGAGAGAGCGTTGAGGTCAAGGTTTGCTATGGGACTTCCCGCAGATCTCATCAGAGACATCCAAAAAAGAGTTCGTCATTTTCATCTTCATGAAACTTATCCTTACAGTAGTTCCCTTGTGCCCAGGCCTCAGATTCCTCAAACCAGACTGGTCCCACCACCAAACCACTATGGTGGGACCAATCATACTACTTACGGAAACTTCCATCAACCCTATTATCATCATCTTCATCGTCCTCTCGTAAATGGAGGAGGGTTCATGACTTCTGCAAATGCCCTCATCACTGCAAATAATGGTTTGATGAGTAACTATCCCCATCCCTCACTGGTGGGGAACAACAGAAGCTTCAACTATGGCCCATCTAATTATGATAATAATAATAATAATAATCATGGGATGATGGTGCCTTATGGAAGCTCTGGCTTGCAACGAAATCCTAGGACATATAATAACCACCATAGAACTCAACTGAACAACGACACCAATAACTATGGGATGATAGTGTCTTCTGGAAGCTCAGGCCTGCAACGAAGTCCAAGTACTTATAATAACCACCATGGAGCTCAACTGAACAACAACGCTTCTCTTACAGTTGGTGCGTTGAATCGAGTTCAGAATGTTGGTTATACCGGTCATAACAGTAGTGGGAGTGCTTCAAATAATGCAATTGTGCCTGTCTCATCATCCTCAGTTGAACCAACTCGACCAAACATATCTGCTGGTCTTCCTTCTTTGCCTCAGCAGTCAATTAATGGTATTAGGAATGCTGTCACTTCTGTGAATCAGCGAGAAGTTGGTCAAATGGATGATCTTAATGAACTTTTCCTCATGCTAGACGACATGGTTTCTCTTGACAAGACTGCAGAGAAACCTAGTACTGGTGAACGTTCAACTTCTGACATTCTTAGCTCCTTCAATATTGAAGACTACATTGAGCTGGGAGATGGTGCTCAAACAAGTGAAAGAAGCATCAATGTTGTGCTGAACAAGTCCTCATCATGTTGCACCAACGAAAGCCCAAATATGGTGATGAGGAACGAGGAGGCATCCACAAACCTGGAGCCCTTGAACATGTTCATGACGGACAAGGCTAATTCACCATCAGGAAACTCAACTCCTGATCAAGAGCAGGCAAGCCATCTTGATTGGGACATGGATCTCATTGAAACGTTGATCTTCGAGGCTGCAGATTCCAGCCAGAAGATTTGGTATCAAATCATGACTTCAGGTCGATGTGCAAGCTTGCAAAAATCAAAGAAGAAAATGTCCTTCCATTCCAATTGCATTTTCTCTCCTTATTTTCCTGCCAATGATCCTCAGAGTTCAGTTGTTTTCACCGAATATATGGTGGAAGCAGGGTTGAGAGAATTCTTCAGGTGGGAAATTTATCTTGGTTTAGTTCCTGGGTCTGTTTGTAACTCAAGCCTGGCTCTAGAGAGCTACTTAGACTCCAGTCAACAAGGGGCGGTGCCCCCCATGGCACCTTCTCGGGTGGCTGGAGGGTTATCTTATTCATCATCAAGTTCTCGAATATTCTATCAAGGAGATGGGCAATCACAGAATGCTGTTGATTCTCACTTTAGTTCATGTTTTGGTAACACATCCAACTCATTTCCTGGAACTGGACGTTCAAATCTGGGTCCAGTTTCTGGTGACATGAGTAATGCAATTCTAAACAGTGTGGCAAATTCAGGGCCAAGTGTTGGAGCTAGTTCATTAGTCACAGATGCAAACTCTGCACTATCTGGGGGACCCCGTTTGCAGAGAAGCGTTAGCAATAACACAGAATCATACTTACGTTTACCTGCATCACCCATGTCATTCTCGTCAAATAATATTAGTATTTCGGGGTCATCAGTTATGGATGGTTCTTCTGTAGTACAGCAGAGCTCTCATCAAGACCAGAATGTTCAACAACTGCAAAAAACTCATGAGCAAATGCAGGGTGCTTCTAGTGCAACATCTTTGCCTGCAGCTCAGACTGGCCCAGCTCCAGTGCCAATGGGTACGCGAGGTCCTGGATCTTTGATACAAGATCCAAATAATCTATCCCAGATGCAGAAGAAACCTCGGATTGATATCAAGCAAGAAGATATAATGCATCAGCAGGTAATACAACAGCTTCTTCAGAGGCAGGATCCCATGCAGTTCCAGGGTCGTAATCCCCAACTACAGCCGTCGTCTTCCATGAAGTGCCCATATGATAGTGGTGTGTGTGCCCGTCGTTTGATGCAATACCTATATCATCAAAGGCAGCGACCAAATGATAATAGTATTGCCTATTGGAGAAAATTTGTGGCTGAATATTACTCTCCTCGTGCAAAGAAGCGGTGGTGTTTGTCATTATATGATAATGTCGGGCAACATACTCTCGGTGTTTTCCCCCAAGCAGCTATGGATGCATGGCAGTGCGACATATGTGGTTCGAAATCAGGAAGGGGATTTGAGGCAACTTTTGAAGTACTCCCCAGACTTAACAAAATAAAATTTGGCAGTGGGGTGATTGATGAACTTGTGTTTTTGGACTTGCCCCGTGAGCATAGATTTCCTTCTGGTTTAATGATGTTAGAATATGGAAAGGCAGTTCAAGAGAGCGTGCATGAGCAGCTTCGTGTTGTTCGTGAGGGTCAACTTCGCATCCTATTTACACAAGATCTGAAGATACTATCTTGGGTGTTTTGTGCAAGACGCCATGAAGAACTTCTTCCTCGAAGGTTGGTTGCACCACAGGTCAGCCAATTGGTTCAAGTGGCCGAAAAGTGCCAGCGTTCTATTACTGAAAGTGGATCTGATGGGCTTTCTCAGCAGGATTTGCAGACAAACAGCAATATGGTAATAACGGCTGGGTGTCAGCTGGCAAAGAGTTTGGACCTACAGTCTCTGAATGACTTGGGTTTCTCAAAACGATACGTGAGATGTTTGCAGATATCGGAGGTTGTGAATAGCATGAAAGATCTGATGGATTTCTGCCGGGACCACAAAGTTGGGGCTCTTGAGGGCTTGAAAAATTATCCTAGACATGCAACTGCAGCCAAGCTTCAGATGCAAAAGATGCAGGAGATGGAACAGTTAGCTAATGTTCAAGGTCTGCCAACTGACCGGAACACACTTAAGAAGCTAATGGCATGGCATCCTGGATTGAATAACCAAACCAACAACAACCCTAACCTTGTTAATCGCGGTGCTTTGAGTGGATCTGCACAAGCTGCATTGGCACTGACTAACTACCAGAATATCCTCATGAGGCAAAACTCCATGAATTCAACCCCCAACTCACTTCAGCGAGAAGCATCTCCCTCCTTCAACAATTCAAACCAGAGCCCCTCTTCACACTTTCAAGGTGCTGCTTCTGCTTTCCTTCCAGGCTCCATGCAGAATTTACCTGTCACCGGTTTCTCTAGTCCCCATTTAACTCCACAGCAGCGGCAGCAGCAGCTGCAACAACTTAAACAGCACTCATTAAGTGCGAATAGCTTGCTGCAACAAAATCACCCACAGGGCTCCCAAACAAATCAGGCTCTACCACCCCAGATGCTCCAGCAACTAGTTCAGGAATTGTCGAATAACAGCGGTGGTGGAGTTCAATCGCAGTTCCATGCTGGACCCAACTCTAATACAAATAATGGTTTGGGTTTTGGAGGTAATCCTCCAACAGCATCTGGAGGAACTTCCAATGTTTCAGGAAGTAACAGACCTGCTGCTCCTAGCCGGAGCAACAGCTTCAAAGCTGCTTCAAACAGTGATTCTTCTGCAGCTGGTGGCAACAACGGATTCAATCAAAAAACATCTGATATACCACAAAATCTCCATCTGCAAGATGTGGTTCAGGATATGGCCCGTGAGTTCACCGATAATGGCTTCTTTAATAGTGACCTCGATGACTATGGGTGGCATGACTAA	4626	0.4464	MFFNFWYTVATATSGHEALETLREFRGFFDLVITDLNMQGMNGFELQKRVKSEFHLPVIIMSADRRKSVMSKSLEQGAAFCLVKPVRREDLRDVWQYAVAGRREKLRVENGRIVSVRDEEEGEGDSASSPGGINNIASTQNSISPNKKQRKKFCKRNRSQVAENEGLVFSGPKRSKICWTVELNSRFLLALRHLGMDKAVPTKILEIMNVPGLTRENVASHLQKYRLFLKRIAEKGILEGLPERALRSRFAMGLPADLIRDIQKRVRHFHLHETYPYSSSLVPRPQIPQTRLVPPPNHYGGTNHTTYGNFHQPYYHHLHRPLVNGGGFMTSANALITANNGLMSNYPHPSLVGNNRSFNYGPSNYDNNNNNNHGMMVPYGSSGLQRNPRTYNNHHRTQLNNDTNNYGMIVSSGSSGLQRSPSTYNNHHGAQLNNNASLTVGALNRVQNVGYTGHNSSGSASNNAIVPVSSSSVEPTRPNISAGLPSLPQQSINGIRNAVTSVNQREVGQMDDLNELFLMLDDMVSLDKTAEKPSTGERSTSDILSSFNIEDYIELGDGAQTSERSINVVLNKSSSCCTNESPNMVMRNEEASTNLEPLNMFMTDKANSPSGNSTPDQEQASHLDWDMDLIETLIFEAADSSQKIWYQIMTSGRCASLQKSKKKMSFHSNCIFSPYFPANDPQSSVVFTEYMVEAGLREFFRWEIYLGLVPGSVCNSSLALESYLDSSQQGAVPPMAPSRVAGGLSYSSSSSRIFYQGDGQSQNAVDSHFSSCFGNTSNSFPGTGRSNLGPVSGDMSNAILNSVANSGPSVGASSLVTDANSALSGGPRLQRSVSNNTESYLRLPASPMSFSSNNISISGSSVMDGSSVVQQSSHQDQNVQQLQKTHEQMQGASSATSLPAAQTGPAPVPMGTRGPGSLIQDPNNLSQMQKKPRIDIKQEDIMHQQVIQQLLQRQDPMQFQGRNPQLQPSSSMKCPYDSGVCARRLMQYLYHQRQRPNDNSIAYWRKFVAEYYSPRAKKRWCLSLYDNVGQHTLGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNKIKFGSGVIDELVFLDLPREHRFPSGLMMLEYGKAVQESVHEQLRVVREGQLRILFTQDLKILSWVFCARRHEELLPRRLVAPQVSQLVQVAEKCQRSITESGSDGLSQQDLQTNSNMVITAGCQLAKSLDLQSLNDLGFSKRYVRCLQISEVVNSMKDLMDFCRDHKVGALEGLKNYPRHATAAKLQMQKMQEMEQLANVQGLPTDRNTLKKLMAWHPGLNNQTNNNPNLVNRGALSGSAQAALALTNYQNILMRQNSMNSTPNSLQREASPSFNNSNQSPSSHFQGAASAFLPGSMQNLPVTGFSSPHLTPQQRQQQLQQLKQHSLSANSLLQQNHPQGSQTNQALPPQMLQQLVQELSNNSGGGVQSQFHAGPNSNTNNGLGFGGNPPTASGGTSNVSGSNRPAAPSRSNSFKAASNSDSSAAGGNNGFNQKTSDIPQNLHLQDVVQDMAREFTDNGFFNSDLDDYGWHD	1541

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele45g0223	1541	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	171	230	IPR017930	-
	Lele45g0223	1541	ProSiteProfiles	Response regulatory domain profile.	1	99	IPR001789	GO:0000160
	Lele45g0223	1541	MobiDBLite	consensus disorder prediction	861	924	-	-
	Lele45g0223	1541	Gene3D	-	172	233	-	-
	Lele45g0223	1541	Pfam	Response regulator receiver domain	6	93	IPR001789	GO:0000160
	Lele45g0223	1541	TIGRFAM	myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class	175	228	IPR006447	GO:0003677
	Lele45g0223	1541	Pfam	LIM-domain binding protein	984	1244	IPR029005	-
	Lele45g0223	1541	MobiDBLite	consensus disorder prediction	128	147	-	-
	Lele45g0223	1541	Gene3D	-	3	161	-	-
	Lele45g0223	1541	SMART	REC_2	1	95	IPR001789	GO:0000160
	Lele45g0223	1541	CDD	REC_typeB_ARR-like	1	99	-	-
	Lele45g0223	1541	FunFam	Two-component response regulator	170	233	-	-
	Lele45g0223	1541	MobiDBLite	consensus disorder prediction	861	901	-	-
	Lele45g0223	1541	PANTHER	LIM DOMAIN-BINDING PROTEIN	776	1530	IPR029005	-
	Lele45g0223	1541	MobiDBLite	consensus disorder prediction	1328	1393	-	-
	Lele45g0223	1541	MobiDBLite	consensus disorder prediction	117	150	-	-
	Lele45g0223	1541	MobiDBLite	consensus disorder prediction	1430	1510	-	-
	Lele45g0223	1541	SUPERFAMILY	Homeodomain-like	172	231	IPR009057	-
	Lele45g0223	1541	SUPERFAMILY	CheY-like	6	104	IPR011006	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele45g0223	Lele-ChrLele45	1882411	1897681	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele45g0223	972	1249	C2H2 Transcription Factor Family	AT1G43850	57.914	1.12e-101	345

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	Others	Lele45g0223		LIM_bind	1.9e-55	No_clan