Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0216 ATGGATAGCAACCCTCCTCCTTCACCCTTGCCTCAACAAGAACAATCTTCTGCTTCTTCTGCTTCTTCGCCTTCTGTTTTGCAAGTGCCTTCGTCTCATGAGTCGTCTTCTTCTCCGAGGACGGTGAGATCGCCGGGTGGCTCGTTGTCATCGGGTCAGCATACCAGCAGGAGGCACGCCACGTTCCGGGGAATCCGGAGCCGGAGTGCTAAATGGGTGTCCGAGATACGGGAGCCTCGTAAAACCACGCGCATTTGGCTGGGGACGTATCCCACGCCGGAGATGGCTGCCGCCGCGTATGACGTGGCCGCTCTTGCATTGAAAGGTCCTGACACCACCCTCAACTTCCCCAATTTGATTCTCTCCTACCCGATCCCGGCGTCATTGTCGGCCACGGATATTCGTGCGGCGGCGTCAGCAGCTGCGGAAGCGAGGCTGGTGAGGTCTGAGGAAACTAGTGGACAAAACGCTGGAGGAGGAGGAGGAGGAAGCCAGGGCGAGGGCTGGAGCCGGACCGGAGAAGTGACGGAGAAAAGCGAGGAATTTATCGATGAGGACGAGCTATTGAATATGCCGAGTTTACTGGATGACATGGCGAGGGGAATGCAGGTGAGTCCGCCGAGGATAAAGTCCCAGTACCCTTCCGATGATTCGCCGACTAATTCAGATCATGGAGATAGCCTCTGGAGTTTTTGA 696 0.5647 MDSNPPPSPLPQQEQSSASSASSPSVLQVPSSHESSSSPRTVRSPGGSLSSGQHTSRRHATFRGIRSRSAKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGPDTTLNFPNLILSYPIPASLSATDIRAAASAAAEARLVRSEETSGQNAGGGGGGSQGEGWSRTGEVTEKSEEFIDEDELLNMPSLLDDMARGMQVSPPRIKSQYPSDDSPTNSDHGDSLWSF 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0216 231 MobiDBLite consensus disorder prediction 208 231 - -
Lele45g0216 231 Gene3D AP2/ERF domain 61 118 IPR036955 GO:0003700|GO:0006355
Lele45g0216 231 MobiDBLite consensus disorder prediction 13 58 - -
Lele45g0216 231 SUPERFAMILY DNA-binding domain 62 118 IPR016177 GO:0003677
Lele45g0216 231 CDD AP2 62 119 IPR001471 GO:0003700|GO:0006355
Lele45g0216 231 SMART rav1_2 61 123 IPR001471 GO:0003700|GO:0006355
Lele45g0216 231 Pfam AP2 domain 62 109 IPR001471 GO:0003700|GO:0006355
Lele45g0216 231 ProSiteProfiles AP2/ERF domain profile. 61 117 IPR001471 GO:0003700|GO:0006355
Lele45g0216 231 MobiDBLite consensus disorder prediction 148 231 - -
Lele45g0216 231 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 14 230 IPR045277 GO:0003700
Lele45g0216 231 MobiDBLite consensus disorder prediction 1 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0216 Lele-ChrLele45 1795827 1796522 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0216 56 231 AP2-EREBP Transcription Factor Family AT5G52020 56.284 2.09e-49 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele45g0216 AP2 2.2e-09 CL0081