Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0215 ATGTGTTCTTCAGACACATATCCGCTTAGGTCCAGATATAGTAGTGATTTGGAAGTGGTGAGGTATACGTCGTCGCCGGCTTCGGATTGTGGCAGTGGCAACGGAGTGAGTTCTTTTGTTTTGTCCGACGAGGAGGTTTTGTTGGCTGCGACTCATCCGAAGAAACGCGCAGGGAGGAAGAAGTTCCGGGAGACTCGCCACCCGGTGTACAGGGGTGTTCGGAGGAGGAACTCCGGCAAGTGGGTGTGTGAAGTGCGGGAGCCCAATAAGAAAACAAGAATTTGGCTGGGGACGTTTCCCACGGCGGATATGGCTGCGAGGGCCCACGACGTGGCGGCAATAGCTCTGAGGGGCCGGTCAGCTTGTCTTAACTTTGCGGACTCTGCTTGGCGGTTGCCACTGCCGGCGTCGAATGAGGCCAAGGATATTCAGAAGGCAGCGGCAGAAGCTGCAGAGGCATTCCGTCCGGGGATGGAATCGGAGAGCGACGAATTGAGGCCAGAAAATGCAGAGGCGACGACCAGCACGGCCGCCACAGTGGTGGAGGAGCAGAGTATATTCATAATGGATGAAGAAGCAGTGCCAGGGATGCCGGAACTGCTGAGGAACATGGCGGACGCGGTGCTGATGTCGCCTACTCATTGCTTTGGGGATCAGCACGATGGTGCTGACGTGGAAGTGGATGATGCTGAGGTGTCATTATGGAGTTATTCATTTTAA 720 0.5528 MCSSDTYPLRSRYSSDLEVVRYTSSPASDCGSGNGVSSFVLSDEEVLLAATHPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFPTADMAARAHDVAAIALRGRSACLNFADSAWRLPLPASNEAKDIQKAAAEAAEAFRPGMESESDELRPENAEATTSTAATVVEEQSIFIMDEEAVPGMPELLRNMADAVLMSPTHCFGDQHDGADVEVDDAEVSLWSYSF 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0215 239 CDD AP2 70 128 IPR001471 GO:0003700|GO:0006355
Lele45g0215 239 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 40 237 IPR045277 GO:0003700
Lele45g0215 239 SMART rav1_2 69 132 IPR001471 GO:0003700|GO:0006355
Lele45g0215 239 PRINTS Ethylene responsive element binding protein signature 92 108 IPR001471 GO:0003700|GO:0006355
Lele45g0215 239 PRINTS Ethylene responsive element binding protein signature 70 81 IPR001471 GO:0003700|GO:0006355
Lele45g0215 239 ProSiteProfiles AP2/ERF domain profile. 69 126 IPR001471 GO:0003700|GO:0006355
Lele45g0215 239 FunFam Ethylene-responsive transcription factor 2 68 127 - -
Lele45g0215 239 Pfam AP2 domain 68 118 IPR001471 GO:0003700|GO:0006355
Lele45g0215 239 Gene3D AP2/ERF domain 69 127 IPR036955 GO:0003700|GO:0006355
Lele45g0215 239 SUPERFAMILY DNA-binding domain 69 128 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0215 Lele-ChrLele45 1782265 1782984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0215 48 237 AP2-EREBP Transcription Factor Family AT4G25470 64.062 2.09e-74 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele45g0215 AP2 1e-14 CL0081