Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0199 ATGATGAACCCGTTGCATCCATTTGGCGATGAAGACTTGTTCTTCCAGATTTCATTTCTGAATCGTTCTACTACTCTCTCAATCCCAACAATCCCAGAACACGAGATCTTTCATGATCCTGCAGAAGAATTAGTGAAGGATTACGAAAGCTTTCCACCTAATTTTGGAAATACTGATCAAGTAATTATACCAAAGGGGAAGGGCAAGCAAAAGCAAAAGGAATTTCCTCCTAAAATTACTGAAGACTCTAACAAGAAATGGATGCATAGAGAAACAGAAAGACAAAGGAGACAAGAAATGGCCACGCTTTGTGCCTCCCTTAGATCGGCTTTGCCTCTCGAATATATCAGGGGAAAGCGATCGGCATCAGATCACATTGATGGGGCTGTGAAATATATCAAACAGCTAAAGAACAAGGTGAAGCAATTGAAGGCAAAGAGAGATGAATTGGTGAAGAATGAACATGCAATCTCTGTTATTGTTCATCCTTATAAGGGTGGAGTTGAGATTATGTGCAGTTATAGCTTCAGAGACTACGTTTTTACTCAGTCAACACTATTGAGTATTTTGATTAAACAAGGGCGTACTGTGGTGAGCTGCACTTCTATCAAAAGGGATGAGATGTTCATTCACACAATTCGATTAGAGCAATCTGATATCTCTGAGAATACTAGTGACTACTCTGAACTGCAAAGAAAGCTTACTGCAACAATATTATCTACAGAAAACAGAGGTTCTTTTGCAGAGAGACTGCATCTGAACCAAAAAACTGCTGATTATGTTGTGCGAAGAGAGTCACTGATTTTGGACTGTACTAATTTGAGCCATTTGTAA 834 0.3921 MMNPLHPFGDEDLFFQISFLNRSTTLSIPTIPEHEIFHDPAEELVKDYESFPPNFGNTDQVIIPKGKGKQKQKEFPPKITEDSNKKWMHRETERQRRQEMATLCASLRSALPLEYIRGKRSASDHIDGAVKYIKQLKNKVKQLKAKRDELVKNEHAISVIVHPYKGGVEIMCSYSFRDYVFTQSTLLSILIKQGRTVVSCTSIKRDEMFIHTIRLEQSDISENTSDYSELQRKLTATILSTENRGSFAERLHLNQKTADYVVRRESLILDCTNLSHL 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0199 277 Coils Coil 126 153 - -
Lele45g0199 277 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 83 163 IPR036638 GO:0046983
Lele45g0199 277 CDD bHLH_AtORG2_like 85 152 - -
Lele45g0199 277 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 84 136 IPR011598 GO:0046983
Lele45g0199 277 Pfam Helix-loop-helix DNA-binding domain 86 137 IPR011598 GO:0046983
Lele45g0199 277 Gene3D - 78 162 IPR036638 GO:0046983
Lele45g0199 277 SMART finulus 90 142 IPR011598 GO:0046983
Lele45g0199 277 MobiDBLite consensus disorder prediction 66 89 - -
Lele45g0199 277 FunFam Transcription factor bHLH126 77 162 - -
Lele45g0199 277 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 76 236 IPR015660 -
Lele45g0199 277 MobiDBLite consensus disorder prediction 59 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0199 Lele-ChrLele45 1661618 1662732 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0199 85 216 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51790 39.735 2.35e-27 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele45g0199 HLH 1.6e-08 No_clan