Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0197 ATGTTTCCTTCACAACGAGGCAATGAGATGATCATAGAATTTTCTAGCCGTCCCCACCACCACCATAATCAACAGCAGCAGAAGAAGATCTCAGAGGATCTCATTCTGGACGGCGGCCATGCTCATGCTTCTCTGGATATCATCAATTTTTCCGATAAAAAATTACAATCCAGTACCAACAACAAGCCGAAGAAGCAACTTTATGAGTCTTCTCATGATAAGATTAACCATTATCGGAAATCTGATAACGAGTACAAGAAGAAGAACGAGAAGCTCATTCACAGGGAGATTGAGAGGCAAAGAAGGCAAGAAATGGCTACCCTCTACGAATCCCTTAGATCTCTTCTTCCTCTAGAGTTCATCAAGGGGAAGCGTTCGATATCAGATCACATGAATGAGGCGAAGAACTACATAAAGCACCTGCAAAAGAAAATCAAAGAACTGAGCGCTGAGAGAGATGAACTGAAGAAATTATCAGAGAATTCTTGGAATCCAGAAACACACGAGTGCGAAAAGTACACATATAGCGGCGTTTTCAGTGTTCACGAGATTAATAACAATGGTGTTGTCGGAATAGAAGTTTCTAGTACCTTCGGAGAGGAAAGCTTTCCCCTTTCAAAATTGCTTAAAATGATGCTCGACGAAGGACTTGGAGTTGTTAACTGTGTTACCAGCCAAGTCAATGGAAGATTAATTCACAGTGTTCAGTGTGAGGTTATTAACAGTTCCGACCGTGCCAACATACCCGACCTGAGAAGGAAAATTGTCAATCTAGTCCCATCATTTACATGTTCTGATTAA 801 0.4132 MFPSQRGNEMIIEFSSRPHHHHNQQQQKKISEDLILDGGHAHASLDIINFSDKKLQSSTNNKPKKQLYESSHDKINHYRKSDNEYKKKNEKLIHREIERQRRQEMATLYESLRSLLPLEFIKGKRSISDHMNEAKNYIKHLQKKIKELSAERDELKKLSENSWNPETHECEKYTYSGVFSVHEINNNGVVGIEVSSTFGEESFPLSKLLKMMLDEGLGVVNCVTSQVNGRLIHSVQCEVINSSDRANIPDLRRKIVNLVPSFTCSD 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0197 266 MobiDBLite consensus disorder prediction 66 87 - -
Lele45g0197 266 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 89 141 IPR011598 GO:0046983
Lele45g0197 266 Coils Coil 131 161 - -
Lele45g0197 266 CDD bHLH_AtORG2_like 90 160 - -
Lele45g0197 266 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 87 156 IPR036638 GO:0046983
Lele45g0197 266 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 66 257 IPR015660 -
Lele45g0197 266 MobiDBLite consensus disorder prediction 55 87 - -
Lele45g0197 266 Pfam Helix-loop-helix DNA-binding domain 93 142 IPR011598 GO:0046983
Lele45g0197 266 Gene3D - 78 171 IPR036638 GO:0046983
Lele45g0197 266 FunFam Transcription factor bHLH126 81 169 - -
Lele45g0197 266 SMART finulus 95 147 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0197 Lele-ChrLele45 1641738 1642885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0197 90 258 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 43.503 9.55e-38 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele45g0197 HLH 4.6e-09 No_clan