Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0196 ATGCCATCCCGGCCGCCCTCCGAGGTGGTTGCCGTCGACCCATATCCAACTTGTTCCCTCTTTTTTCTCTCTTTCCTCTGTTTTCGCAGACGCAGCAGAAAACGCACCACCCCTTCTGATGATTCCGAGTCAGAGCCTCCTCATCGCTTCTCCTACTCCTCCCTCCGACTCGCCACCACCTCCTTCTCGACCCGCATAGGCCAAGGCGGGTTCGGACCTGTCTTCTCCGGCGTTCTGCCTTCGACCCGAAAACCCATCGCCGTCAAGCTCATGGACTCTGCCTCTCTACAAGGCGAGCGCGAGTTTCACAACGAGCTCTTCTTCGCTTCCAAGATTTGTTCCCAACACGTCGTCGTCGCGATAGGCTCCGCCTTCGATAAGAATCGCCGGAGATGCTTGCTGGTGTACGATCTTATGCCCAACGGAAATCTTCAGGATGCTCTGTTGCGACGGAAGAACCCTGAGCTGATGGATTGGAAGAAACGTTTCGCCATAATTATTGATATAGCTAAAGGAATCCGTTACCTTCATTCTTGCGACCCACCTGTAATTCACGGAGATATCAAGCCGAGTAATATTCTACTGGACTCTTCTTTCTCAGCAAAAGTTGCCGATTTCGGGCTCGCTCGGCTGAAATCGGAATACCAATACGGTTTCGAGATTTTCGGTGGAATAGATTATTCTGGGTCAGTGGTGGAGGAAACAGAGAGCGTAAACACTGGTTTCGAGGAGCAAACAGTATCCATGCCAGAAACATCGCCGGGGACAGACTTCCCGGCCAAGGAAAACTGCGACAGGGGTAAGAAGAACGTTGAAAGGTTAAAGAGCAGATCAATGAAGGATTGTTGGAGGAAGGAAGACGATGACAATAAGAAAAAGAGCAAGAAGCAATTCGAATGGTGGAGAGAGGAGTACCGTGGGAAGCTGGAAAAGAAGAACAAGAAAAAGGTGTTCTACAGTGATGAAGAAGCATTTGACAGAGAGAGAACGAAGAACAAAAGAAGATCTAGGAGTATCGATTGGTGGTTCGACGGAATCAGCAGGATCAGCCATGATTCTTTCAGCGGAGAAATTCACAATCCCAAGAGCGGTGGAATCAGCAGTACTCCAAGTTTGAAAGGAACAGTTTGTTACGTAGCTCCAGAGTACGGTCATGGCGGAGAAATAACAGAGAAATGCGATGTGTACAGTTTTGGGGTCCTATTGCTAGTGATAGTCTCAGGAAGACGGCCGATTGAGGTGATGAATGGTTCGCCATTGTCAGAGCTTCAGAGAGGGAATCTATTGTACAGGGCACGCCATTGCGCGCGTAACGGGAAGCTTGTAGAACTGGTGGATCAGAGTATGACGTGTATGAAGTTGCCGGAGAGAGAGGAGGCTCTGCTCTGCATAAGAGTGGCTCTGCTGTGTCTGGTGAAGTCACCGTCTCGTCGTCCTTCAATGGAAGAGGTTGTGACAATGCTCTCCGGAGAGATGGAGCCACCGCCATTGCCGCCCGAGTATTCGTCTTCTTCACCATCTCCATTTCCCTTAGTCTGGGAAAAACTCTGA 1551 0.4997 MPSRPPSEVVAVDPYPTCSLFFLSFLCFRRRSRKRTTPSDDSESEPPHRFSYSSLRLATTSFSTRIGQGGFGPVFSGVLPSTRKPIAVKLMDSASLQGEREFHNELFFASKICSQHVVVAIGSAFDKNRRRCLLVYDLMPNGNLQDALLRRKNPELMDWKKRFAIIIDIAKGIRYLHSCDPPVIHGDIKPSNILLDSSFSAKVADFGLARLKSEYQYGFEIFGGIDYSGSVVEETESVNTGFEEQTVSMPETSPGTDFPAKENCDRGKKNVERLKSRSMKDCWRKEDDDNKKKSKKQFEWWREEYRGKLEKKNKKKVFYSDEEAFDRERTKNKRRSRSIDWWFDGISRISHDSFSGEIHNPKSGGISSTPSLKGTVCYVAPEYGHGGEITEKCDVYSFGVLLLVIVSGRRPIEVMNGSPLSELQRGNLLYRARHCARNGKLVELVDQSMTCMKLPEREEALLCIRVALLCLVKSPSRRPSMEEVVTMLSGEMEPPPLPPEYSSSSPSPFPLVWEKL 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0196 516 ProSiteProfiles Protein kinase domain profile. 60 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g0196 516 MobiDBLite consensus disorder prediction 490 512 - -
Lele45g0196 516 Pfam Protein kinase domain 363 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g0196 516 SUPERFAMILY Protein kinase-like (PK-like) 43 504 IPR011009 -
Lele45g0196 516 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Lele45g0196 516 Gene3D Transferase(Phosphotransferase) domain 1 139 250 - -
Lele45g0196 516 Gene3D Transferase(Phosphotransferase) domain 1 328 494 - -
Lele45g0196 516 Gene3D Phosphorylase Kinase; domain 1 47 138 - -
Lele45g0196 516 Pfam Protein tyrosine and serine/threonine kinase 62 214 IPR001245 GO:0004672|GO:0006468
Lele45g0196 516 PANTHER OS07G0586332 PROTEIN 19 244 IPR044576 -
Lele45g0196 516 SMART serkin_6 60 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g0196 516 MobiDBLite consensus disorder prediction 240 267 - -
Lele45g0196 516 FunFam Os07g0541700 protein 139 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0196 Lele-ChrLele45 1635690 1637240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0196 369 495 Receptor kinase-like Gene Family AT2G43700 32.283 1.52e-12 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Lele45g0196 PK_Tyr_Ser-Thr 1.7e-25 CL0016