Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0186 ATGAACCGCCTCTCTCGTCTTTATATTGGGATACGTCACAACTCACAACACCACCATTTCACGTACTTCTATTTTAATTGCCTCATCATTTTCACATTCTCCCCAAAACTCTTCTCGATTGATTCTTCCCAATCCCAAACCATGGAGGCTCCCACTCTCACCGATTTGCTCAATCGAATTTCCGCAGAATTCCCCTCCCGTCGAGCCATCTCCGTCTCCGGCAAGTTGGATCTCCCCTATTCTCGTCTTATCGAACTCATCGAACGCGCTGCTTCTCGTTTAGTCTCCTCTGGAATCAACGCCGGAGATGTCGTCGCTCTTACCTTCCCCAATACCGTCGAGTTCATCATAATGTTTTTGGCCGTGATTCGTGCACGAGCCACGGCTGCGCCGCTGAACGCCGCCTATACGGCGGAGGAGTTCGAGTTTTACTTATCCGACTCGGAGTCGAAGCTCTTACTGACGTCCCAAGAAGGAAATGCTCCGGCTCAAGCCGCGGCTTCGAAGCTTAATATCCCTCACGCGACGGCTTCGCTTTCCAAAGCCGATGACGCCGAGCTCAGTCTATCTCTGCCTCAGAACAATTCAAAATCGGACTCGGCCGCCAAACTCGTTAACGACCCTTCCGATGTAGCCCTATTCCTCCATACCTCTGGCACGACAAGCCGGCCCAAAGGAGTGCCTCTAACACAGCACAACTTAGCCTCTTCGGTTCAGAACATAAAGTCCGTGTACAGACTCACTGAGTCCGACTCGACGGTGATCGTTCTGCCACTCTTTCATGTCCACGGCCTCATGGCGGGATTACTGAGTTCACTCATTTCCGGGGCCGCTGTGACGCTGCCAACGGCGGGTCGTTTCTCGGCTTCGACGTTTTGGGCAGACATGCTGAATTATAGCGCGACGTGGTACACGGCGGTCCCGACCATACACCAGATCATACTGGACCGTCACTCGAGCAAACCAGAACCCCACCCGAAACTCCGGTTTATTCGTAGTTGCAGCGCGTCGCTCGCACCAATTATATTGGGTCGGCTGGAGGAGGCATTCGGAGCCCCGGTTCTTGAGGCCTATGCAATGACGGAAGCGTCCCATCTAATGTCATCAAACCCGTTGCCGGAGGACGGCCCACACAAGCCCGGGTCGGTCGGGAAACCAGTGGGTCAAGAAATGGCGATACTGAACGAGAAGGGAGAGATCCAGGAGGCTGGAGTTCACGGAGAAGTCTGTATCCGGGGCCCGAATGTCACAAAAGGATACAAAAATAACCCGAGTGCTAATACGACAGCGTTTCAATTCGGATGGTTCCACACCGGTGATCTCGGGTTCTTTGATTCAGACGGGTATTTGCATCTGGTTGGACGAATTAAGGAGCTCATTAATCGTGGAGGGGAGAAAATATCGCCCATAGAAGTAGACGCTGTCTTGTTATCTCATCCGGACATTGCTCTGGCGGTTGCTTTTGGAGTCCCAGACGACAAATATGGCGAAGAGATAAATTGTGCAGTAATAGCAAGAGAAGGATCAGAAATTGACGAGGAAGAGGTGTTAAAGTTTTGCAAGAAGAATCTTGCATCCTTCAAAGGCCCCAAGAAGGTTTTCATCACTGATTCTTTGCCCAAGACTGCCACCGGCAAGATCCTCCGCCGTCTTGTTGCTGAACACTTCGTTTCCCAAAAGTTAGCTTCTGTTGTGTAA 1698 0.5159 MNRLSRLYIGIRHNSQHHHFTYFYFNCLIIFTFSPKLFSIDSSQSQTMEAPTLTDLLNRISAEFPSRRAISVSGKLDLPYSRLIELIERAASRLVSSGINAGDVVALTFPNTVEFIIMFLAVIRARATAAPLNAAYTAEEFEFYLSDSESKLLLTSQEGNAPAQAAASKLNIPHATASLSKADDAELSLSLPQNNSKSDSAAKLVNDPSDVALFLHTSGTTSRPKGVPLTQHNLASSVQNIKSVYRLTESDSTVIVLPLFHVHGLMAGLLSSLISGAAVTLPTAGRFSASTFWADMLNYSATWYTAVPTIHQIILDRHSSKPEPHPKLRFIRSCSASLAPIILGRLEEAFGAPVLEAYAMTEASHLMSSNPLPEDGPHKPGSVGKPVGQEMAILNEKGEIQEAGVHGEVCIRGPNVTKGYKNNPSANTTAFQFGWFHTGDLGFFDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDIALAVAFGVPDDKYGEEINCAVIAREGSEIDEEEVLKFCKKNLASFKGPKKVFITDSLPKTATGKILRRLVAEHFVSQKLASVV 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0186 565 Pfam AMP-binding enzyme C-terminal domain 471 546 IPR025110 -
Lele45g0186 565 FunFam 4-coumarate--CoA ligase 2 458 559 - -
Lele45g0186 565 Pfam AMP-binding enzyme 61 462 IPR000873 -
Lele45g0186 565 ProSitePatterns Putative AMP-binding domain signature. 214 225 IPR020845 -
Lele45g0186 565 Gene3D - 456 559 IPR045851 -
Lele45g0186 565 FunFam Peroxisomal-coenzyme A synthetase 52 455 - -
Lele45g0186 565 CDD FACL_fum10p_like 65 554 IPR045310 GO:0016874
Lele45g0186 565 Gene3D - 44 455 IPR042099 -
Lele45g0186 565 SUPERFAMILY Acetyl-CoA synthetase-like 32 559 - -
Lele45g0186 565 PANTHER ACYL-COA SYNTHETASE 48 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0186 Lele-ChrLele45 1563257 1566272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0186 52 559 Monolignol Biosynthesis Gene Families AT4G05160 31.870 3.46e-61 209
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0186 45 1563257 1566272 Lele46g0205 46 1279685 1284694 ECH
Lele45g0186 45 1563257 1566272 Lele45g0186 45 1563257 1566272 ECH
Lele45g0186 45 1563257 1566272 Lele48g1257 48 16945861 16949177 hybridization