Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0178 ATGCGAATACCTAGAAACCCTAGTTCGGCTCGGACCCTCTCTAACAGTCGTCTCTTGACACCCATTCAGAAGCCACAAGGTAAAGATCTCCACCGTAGCTATCCCCTTTACGAGTTGGGAATGGCTCCCAAGCAGCCGAGTACGGGCCTTTTCGTCGGGTTGAACAAGGGCCATGTGGTGACCAAGAAAGACTTGGCTCCACGCCCATCAAACCGCAAGGGGAAAACAAGCAAGCGTGTCCATTTTGTGAGGTCGTTGATACGGGAGGTCGCAGGATTTGCTCCATATGAGAAGCGTATAACTGAGCTTCTCAAGGTTGGTAAAGATAAAAGAGCTTTGAAGGTGGCCAAGAGAAGGTTAGGCACTCACAAGAGGGCTAAGAAGAAGCGTGAGGAGATGTCCAATGTTCTCAGGAAGATGAGGTTATTTCATGACCTTTTAATGTTTCGTACTTGGCTGGTGGAGGTGGAGAGAAGAAGAAGGCTTAATTTTCCATTTTCACAAGAAGCTTCATAG 516 0.4806 MRIPRNPSSARTLSNSRLLTPIQKPQGKDLHRSYPLYELGMAPKQPSTGLFVGLNKGHVVTKKDLAPRPSNRKGKTSKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRRLGTHKRAKKKREEMSNVLRKMRLFHDLLMFRTWLVEVERRRRLNFPFSQEAS 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0178 171 Gene3D 60S ribosomal protein L36 41 145 IPR038097 -
Lele45g0178 171 Pfam Ribosomal protein L36e 48 141 IPR000509 GO:0003735|GO:0005840|GO:0006412
Lele45g0178 171 PANTHER 60S RIBOSOMAL PROTEIN L36 37 141 IPR000509 GO:0003735|GO:0005840|GO:0006412
Lele45g0178 171 FunFam 60S ribosomal protein L36 41 145 - -
Lele45g0178 171 ProSitePatterns Ribosomal protein L36e signature. 95 105 IPR000509 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0178 Lele-ChrLele45 1452400 1453955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0178 48 141 Cytoplasmic Ribosomal Protein Gene Family AT2G37600 86.170 2.48e-53 163