Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0176 ATGGATTCGAGTCATGTGAAGCAATTCGATCGCTTCAAGGCTGACGGCGCAGGACCGAACCCAGGTCGAAAGGTTCGGGTCGTGGCCAAGATCAGGGGCTTTGCGTTTCCGGAGGTCGACGCTCAGAGTGGATCTTCGAGATCAGTAGACTGGATTTCGGTGAACAAGCCTCCCGGAGAGAGTTCAGAGGGAGTCTTAATCTCCTTCAGAGACCATTCTTTCAGTCGTAAAGAGTCTTGCTGGGTGGACTATTGTTATGGGGACAATGAAGAAAATGAAATGATCTATTCAAAAGACGTGAAGCCTCTTATAGCTGCAGTTTTTGAAGGCCATAACAGCTCCATTATTGCGTATGGAGCAAGAGGCAGCGGAAAGACTCATGTGATTCAGGGTTCTGCTAAGACACCTGGTTTGTCAGTGCTTGCTGTTGCTGAGTTTCTTTCACTGGCTGAACAAAATGGCAAATCTATTGCTATATCATTGTATGAGGTTGATCATCGGGAGCATGCCGTTGATTTATTAAATCCAGAACAACCAGCCATTTTAGTTCTTGAAGATCGAGGCCGTATTCAGTTTAAAGGGCTTTCTCAGATTCCAGTGAAATCCATTACAGAATTTCAGAAAACATACTCCACTGCTTGTGCTACTCGAAAAGCAGCCATGAAAAAGGGAAATGACCATGCTCGTAGGACCCATGTGGGACTAATAGTGCATGTCTTTTCTGAAGCTGAAGGCAAAGAAACTGGCTCTGTGGGCAAAATGAATTTTGTTGACTTGGCAGGTTATGAAGATGCCAGGAAGAAGAGTTTTGAAAGCTCTTGTCTAGCTGAAACTAATAAAATTAACAAGTCCATATATGCTTTATTAAATGTCTGTCACGCTTTGAGCACCAATGAAAGTCGTGTCCCCTATCGCGAGAGCAAACTTACCCGCATGTTACAGGACCCTTTGAGTGGGACTAGCCGAATTTTGATGGTTGTCTGCATGAACCCATCTTTTTGCCAAGACACTATATACATGTTAAGCTTAGTAACCCGGTCATGTCAAGTGATTCATCGAGTGACTGTAGACGCCACAAAGAAAAGTGAAAGTTGTTCTGCAAGACGGATGATGCTTACATCTCATAAGAGTAACCTGCCCAAGAGTGTGTCTTCTACGGCAAAAAAATTAACTGGCTCTAGATCACATATGCTTGAAAAGAAAGCTGATGTGATAAAATCTGCAATAAAAGGAAGGAAATTATTTGATCAAGCAAGTCATTCTGCTAAAGCTGAGAAGGCAAGGTTGTTAGATACCAGTTCTATTGTAGAAACTTCGCTGCAAGAAGAGGAAAAATCGATTGTACCTGTTACCGAAGCATTATTGCCTGCATCACTGGATGACTCAGTTTCAGATGCTAGGCATCAAGCAGAACTCATGGATGACTCAGTTTTAGATGCTAGGTATGAAGCAGAACTCATGGTGGAAAAGGCTGTCCCTGAGAATATTGTGGATCATCGAGAGGAGCATACCCCTAATTCTGGCAAGTATAAGAAACCATTGTCCACAGACTCTATAGTTCAAGAAGGTCATGATATGGATAAGGAAAACGACAGTTTCATTGCCAATAAAGATGAATCCCCACCAATTAGTGCTCAACTACGTGAACTGTCAAACAATTTGAAGCTTCTCTTATCAACCCCAATAAGCGTGAAGTTACCAGAACAGGATTGCATCATATCTTTTGACAATCAGGTGTCTTCTACAGATATTGTGGAACCAAAAACTCCCGTCACGGAACAAACTGTGGGTGCTATTGATAGATGGAATGTCAAAAGTCCTTGGCAACCATATAGTGCACGCAGTTCTGGAATGAAGGGGATTGGTGAGAAAAGAGCAACCTACATACTTGAGCTTCGCGAAGAATCTCCTGAACCTTTCAAGAGTCTTGATGATTTACAGGACATTGGGCTTTCAGCAAAGCAGCTGGATTCTATTGGCAAGAAAGTAATGAGAAGAATAATTTGGGCATACTATTATTTGGTGATATATAGATTGGCATCCATATGTTCAATTATGCCAGTTGAAAAACACAAGGGTTTTGGTACTACAGATGTCATGAAAGCAGAGGATGGAAATGACTCCTTAGATACCATAATCAGAAAGGCAATTGGCAGAGAACCTTTTCTTTCTTTTCCAAGGGCTAGTGACAGTTCGGTCCAGTGGATACAATTACTTCATGCGTTAGATCAGCAAGAACTGCCAGGCTGGCCTTTGCTCTCTCCTCTGAAGGTTCAGTTGCAGAAGTGTGAAAAGTGTTCCCGAGAATTCTGCTCTTCAATTAATTACAGAAGACATATACGTGTTCACCATCGGCTGAAAAAGATTGATAAGGATTCTACAAAAAATAGAGATCTGCTAGGAGCTTATTGGGATAAGCTATCTGTAGAAGTGGCAAAAGAAGTTGTATCATTCAAGAATGCAATGCTGGAGGAAGTTCCAGGGTCTTCTATTTTAAAAGCGCTGACGACTCTGGTTCAGAAACAAGGATTTTCTTCACTTCCACAGAATTATCTGAAGGCTGGTTCTGCCCTTTTGGATATTGTTCAAGCAAGATCTTCCACTCTTTCTATATCTTCCAATGAGTTCTTTGGTATCCTTGATAGTGCCAGTGAAAAAACATTTTTATGTGGGGCAGCAGTGTCAATGCAAAAATATATTTTTGATGGAGAACCGGGAAAGATTGGCCTTGAACCAAAAAACCTAGTTGCTTGTACTAGTTTCTTGCTAGAACAGAAATTGGTAATGGCGTGGCTTGCTGACAAGGAAGCTGAAGCATTAAGATGCCAGAAGCTGCTAGTGGAGGAGGAAGAAGCTGCTCAGAAAAGGCAAGCTGAGATTTTGGAGAGGAAACGCCAGAAAAAGCTTAGGCAAAAAGAACAAAAAGCAAAGGGGCAAAAGCTTGAGGATGAGGCAGAAATGAAAAAGAATGGCAGCAGTAGAGTAGCTGACAGTTCATTAGCAGAAGCATCTTCAAACACACGTGACTTTGGAGAACATAAGCTAAATACATTTGTAGGCCATGGTCCTTCACTACACATGCCCTTTCATTGCACAAACACCAATGAAGGTGTGGATGGGGGTTCTCTGTCAATGTATGATTGTGGAACCGATCAAAACATTGAGCAAGAGACATCCCAAGGACACGTTTGTCAACAATTGGTTCCTCAACCAAAATCACAATGGGCTGTAGCTAATGGTTTTCATGCAAATCATAACTCTCAAATTTCCAAGCCTGGAGTCATTCAAAGGTACGGGAGTCACCATGATCAAAAGGCTGCTCCCATGCTTAATGGTAACAAAGTATGGAGTCGAAAGCCTAAGCAAAAAATTATTGGGGTACATTCAAGAGCCAAATTTGAAAAAGAACTAGATGAGGGTAAAAACTATGAAGTTTTAATAGGGTCTATATTTGTTACTCTTGAAAATTGCAGCCAATCGGAGGATAATCTATTGGCATCTAGGGAGGACTCCATGGTAGGGAATTTAACCAAGCATAATAATGCCCAGGAGAAGCCAGTCAAACCTGATTCTATACAGGTTGGTAACAATCGGTTAATGGTTAAAGCTGTTAAGCTTTGGAGGCCGGTTACCCATCATGGAACTGAATATTCATTACCACTTCACTGTGCTCGTCCAGAAGCTGATGCAACAGATGGGGAAAAAAAAGACCAGAATTTGTCCGATCAAAATTCTTTAAGGCCGTGTGACTTAGGTAATAGTAATAGTAGTTTTGAAAATAATTCCTCCTATCTAGAAACTCAAGTGGGTTCAGGAAACTTGCGGTTTTCCAGTGAAGCTGCCAAAGCTTTTCTTGCAGAAAGATGGAGAAAAGCTATATCATCAAACCATTTGAAATTGATTCTTTCACCTGACTCTGAACCTCCTAGGTGCACGGAGGCACAAAATTGTGAACTAGTTGCATGTCAATCTTCAAATATTGACAAATGCCACATTTTTGCAAGTGCAGAGGCTCAGCTGCCTGCAACCTTATCTAAATCCAAAACCAGAATGAAGCCCCAAAAGGGTGTAAAGATTAAGTACATTCCTAAACAAAGGACAGTTACCTAA 4110 0.4156 MDSSHVKQFDRFKADGAGPNPGRKVRVVAKIRGFAFPEVDAQSGSSRSVDWISVNKPPGESSEGVLISFRDHSFSRKESCWVDYCYGDNEENEMIYSKDVKPLIAAVFEGHNSSIIAYGARGSGKTHVIQGSAKTPGLSVLAVAEFLSLAEQNGKSIAISLYEVDHREHAVDLLNPEQPAILVLEDRGRIQFKGLSQIPVKSITEFQKTYSTACATRKAAMKKGNDHARRTHVGLIVHVFSEAEGKETGSVGKMNFVDLAGYEDARKKSFESSCLAETNKINKSIYALLNVCHALSTNESRVPYRESKLTRMLQDPLSGTSRILMVVCMNPSFCQDTIYMLSLVTRSCQVIHRVTVDATKKSESCSARRMMLTSHKSNLPKSVSSTAKKLTGSRSHMLEKKADVIKSAIKGRKLFDQASHSAKAEKARLLDTSSIVETSLQEEEKSIVPVTEALLPASLDDSVSDARHQAELMDDSVLDARYEAELMVEKAVPENIVDHREEHTPNSGKYKKPLSTDSIVQEGHDMDKENDSFIANKDESPPISAQLRELSNNLKLLLSTPISVKLPEQDCIISFDNQVSSTDIVEPKTPVTEQTVGAIDRWNVKSPWQPYSARSSGMKGIGEKRATYILELREESPEPFKSLDDLQDIGLSAKQLDSIGKKVMRRIIWAYYYLVIYRLASICSIMPVEKHKGFGTTDVMKAEDGNDSLDTIIRKAIGREPFLSFPRASDSSVQWIQLLHALDQQELPGWPLLSPLKVQLQKCEKCSREFCSSINYRRHIRVHHRLKKIDKDSTKNRDLLGAYWDKLSVEVAKEVVSFKNAMLEEVPGSSILKALTTLVQKQGFSSLPQNYLKAGSALLDIVQARSSTLSISSNEFFGILDSASEKTFLCGAAVSMQKYIFDGEPGKIGLEPKNLVACTSFLLEQKLVMAWLADKEAEALRCQKLLVEEEEAAQKRQAEILERKRQKKLRQKEQKAKGQKLEDEAEMKKNGSSRVADSSLAEASSNTRDFGEHKLNTFVGHGPSLHMPFHCTNTNEGVDGGSLSMYDCGTDQNIEQETSQGHVCQQLVPQPKSQWAVANGFHANHNSQISKPGVIQRYGSHHDQKAAPMLNGNKVWSRKPKQKIIGVHSRAKFEKELDEGKNYEVLIGSIFVTLENCSQSEDNLLASREDSMVGNLTKHNNAQEKPVKPDSIQVGNNRLMVKAVKLWRPVTHHGTEYSLPLHCARPEADATDGEKKDQNLSDQNSLRPCDLGNSNSSFENNSSYLETQVGSGNLRFSSEAAKAFLAERWRKAISSNHLKLILSPDSEPPRCTEAQNCELVACQSSNIDKCHIFASAEAQLPATLSKSKTRMKPQKGVKIKYIPKQRTVT 1369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0176 1369 Gene3D Kinesin motor domain 22 397 IPR036961 -
Lele45g0176 1369 MobiDBLite consensus disorder prediction 1229 1254 - -
Lele45g0176 1369 Coils Coil 951 971 - -
Lele45g0176 1369 Pfam Kinesin motor domain 72 346 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele45g0176 1369 PRINTS Kinesin heavy chain signature 253 271 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele45g0176 1369 PRINTS Kinesin heavy chain signature 302 323 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele45g0176 1369 PRINTS Kinesin heavy chain signature 110 131 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele45g0176 1369 PRINTS Kinesin heavy chain signature 222 239 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele45g0176 1369 ProSiteProfiles Zinc finger C2H2 type domain profile. 761 788 IPR013087 -
Lele45g0176 1369 MobiDBLite consensus disorder prediction 992 1006 - -
Lele45g0176 1369 MobiDBLite consensus disorder prediction 975 991 - -
Lele45g0176 1369 SMART kinesin_4 22 358 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele45g0176 1369 MobiDBLite consensus disorder prediction 964 1006 - -
Lele45g0176 1369 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 686 1367 - -
Lele45g0176 1369 SUPERFAMILY RuvA domain 2-like 618 663 IPR010994 -
Lele45g0176 1369 ProSiteProfiles Kinesin motor domain profile. 24 350 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele45g0176 1369 ProSitePatterns Zinc finger C2H2 type domain signature. 763 784 IPR013087 -
Lele45g0176 1369 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 359 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0176 Lele-ChrLele45 1424978 1439226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0176 703 1366 C2H2 Transcription Factor Family AT4G25610 42.051 4.03e-137 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele45g0176 Kinesin 2.1e-56 CL0023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0176 45 1424978 1439226 Lele45g0176 45 1424978 1439226 ECH
Lele45g0176 45 1424978 1439226 Lele48g1269 48 17052913 17059005 hybridization