Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0172 ATGCCTTCATGGTGGGGGAAATCATCGTCAAAAGAAACCAAGAAGAAAGGAAGTAAAGAAAGTTTCATTGATACAATACAAAGAAAACTTAAAATCCCGTCTGAAGTTAAGGTAAGCGGTAGGTCTGGAGAACCTCAGAGAAACTGCAATGACACAATCTCAGAGAAGGGGGCTCAGTCTCCGGTTGAATCAAGGTCTCCTTCACCATCCAAAGTAGCACGGTGTCAAAGTTTTGCCGAAAGGCCTCGTGCTCAGCCACTACCACTTCCTGGAAGGCATCCTTCATGTATCGGACGAACAGATTCTGAAATTTGCATATCATCAAAGTCAAGAGGGGAGAAGGGTTCCAAGACATCATTGTATCTGCCACTCCCAAGACCTGCATGCATACGTAATAGGCCAAACCCTGCTGATTTAGATGGAGACCCTATCACTGCCTCTGTATGTAGTGAAAGCTCTGCTGATAGTGATGAGCCAGCTGATTCATGTCAACGCAGTCCACTGGCAGCTGACTCAGAGACTGGGACTAGAACTGCTGCTGGCAGCCCTTCCAGCTCAATGCTCAAGGATCAATCATCTACTGGTTTGCAACTAAATTCAAGAGAGGTCAAAAAGCCAGCAAACATTCTGAGTAATCATGTATCTCCTACATCCCCAAAACGGAGACCTTTAAGCAATCACGTGCCAAATCTGCAAGTTCCTCCTCATGGTGCTTTCTTTAGTGCTCCTGACAGCTCCAAGTCAAGCCCATCAAGAAGTCCATTGAGAGCATTTGGCACAGAACAAGTGCTGAGCTCTGCTTTTTGGGCTGGAAAGCAATATTCGGAGGTCAATTTTATTGGATCTGGGCACTGCTCCAGTCCAGGTTCTGGTCAGAACTCTGGGCATAATTCAATGGGAGGGGACATGACAGGACAGATATTTTGGCAACCAAGTAGGGGTAGCCCCGAGTATTCTCCTGTTGTTAGCCCCAGAATGAATAGTCCTGGTCCAAGCTCTAGGATTCAAAGTGGAGCCGTCACACCCATTCATCCTAGAGCTGGGCCAACACCCTCTGAATCACAGACTGGATGGGTTGATGATGGGAAACAACAGAGTCATCGTCTGCCTCTTCCGCCCCTAACAGTTACGAATTCCTCACCTTTCTCTCATTCGAATTCAGCAGCAACATCTCCATCTATGCCAAGAAGTCCAGGAAGAGCAGATAATCCTTTGAGCCCTGGTTCTCGATGGAAACAGGGAAAGCTACTGGGAAGAGGCACTTTTGGACATGTCTATCTTGGCTTCAATAGTGAAAGTGGTGATATGTGTGCAATGAAGGAGGTAACATTGTTTTCAGATGATGCCAAGTCCAAGGAAAGCGCCAAGCAATTAATGCAGGAAATTACTCTATTAAGTCGTTTACGGCACCCCAATATTGTGCAGTATTATGGTTCTGAGACAGTAGATGACAAGCTTTACATATACCTAGAGTATGTACCTAGAACCATATATAAACTTCTTCAAGAATATGGGAAATTTGGTGAACAAGCTATCCGCAACTATACCCAACAAATTTTGTCGGGGCTTGCTTATTTACATGCTAAAAATACTGTCCACAGGGACATCAAGGGAGCAAATATACTTGTAGATCAAAGTGGCCTGGTAATCAAGTTGGCAGACTTTGGTATGGCAAAACATATAACAGGGCAGTCATGTCCATTATCATTTAAGGGAAGCCCTTATTGGATGGCTCCTGAGGTCATAAAGAACTCTAGTGGTGCCAACCTTGCTGTGGATATATGGAGTCTTGGTTGCACAGTTTTGGAAATGGCTACAACCAAGCCTCCTTGGAGTCAGTATGAAGGGGTTGCAGCCATGTTTAAGATTGGTAATAGTAAGGAACTCCCTATGATCCCAGATGACCTCTCAGATGAAGGAAAGGATTTTGTTCGGAAATGCCTACAACGTAACCCACATGATCGTCCGTCGGCCCAGCAACTATTGGAACACCCTTTTGTAAAATGTGCTGCATCTTTGGAAAGACCTTTTCTAGGTGCTGAAGCATTAGATCAGGTCTCTGGTATTGCGCATGGAGCAAAATCTCTGGGCACGGGACAAGGCAGAAACCTCTCTGCCCTGGATAATGACAGGCTTTCTGGTCATTCTTCTAGGGTGTTGAAACCTAATCCACATGCCAGTAATGAAATCCATATTCCAAGGAATATTTCTTGCCCTGTCTCTCCCATTGGAAGCCCACTTTTGCGGTCAAGATCACCACAGAACATGAATGGGAGAATGTCTCCCTCTCCTATATCTAGCCCCCGTACACTTTCTGGTGCATCCACGCCTCTCACTGGTGGTAGTGGTGCCATTCCATTTGGCAATCATCTGAAACAGTCCGCTTACTATCAAGAGGGCCTTGCAAACTTGCCAAAGCATTCAAATGCTTTCTACAATAGTGCCCCTGCTCATCATGACTCTGGAGTTGACATCTTTCGCAATCTGCTAATGGGGTCTCAATCAGAATTGATTCCGAGTGAAAATGATGTTCTGGGGAAGCATTATGCGAGGCCTCCTATCGAGCCTTATGATGTTCAGTCAATCTTGGCTGATCGTGTTTCCCGACAGCTACTGGGAGATCATGTTAAGATTAACCCGTCTCTGGATCTTAGCCCCAACTCTCCTTTGCTCAACCGAGCTAATGGAAGTAATTGTACAATAAGGACAATTTATGTAATAAATATGGATTTGGGGGATAGACTTGCTGGGACCACACAGTCCATTTTGTTTGGTTTTAAGCTCAGGCATGGGGAGTTCAGATCTTTACTTGTTGAGCAAACTAAACCACGTTATGAAACTTTCTTACATGATTCATCTATATCAGCTTACACATAG 2877 0.4501 MPSWWGKSSSKETKKKGSKESFIDTIQRKLKIPSEVKVSGRSGEPQRNCNDTISEKGAQSPVESRSPSPSKVARCQSFAERPRAQPLPLPGRHPSCIGRTDSEICISSKSRGEKGSKTSLYLPLPRPACIRNRPNPADLDGDPITASVCSESSADSDEPADSCQRSPLAADSETGTRTAAGSPSSSMLKDQSSTGLQLNSREVKKPANILSNHVSPTSPKRRPLSNHVPNLQVPPHGAFFSAPDSSKSSPSRSPLRAFGTEQVLSSAFWAGKQYSEVNFIGSGHCSSPGSGQNSGHNSMGGDMTGQIFWQPSRGSPEYSPVVSPRMNSPGPSSRIQSGAVTPIHPRAGPTPSESQTGWVDDGKQQSHRLPLPPLTVTNSSPFSHSNSAATSPSMPRSPGRADNPLSPGSRWKQGKLLGRGTFGHVYLGFNSESGDMCAMKEVTLFSDDAKSKESAKQLMQEITLLSRLRHPNIVQYYGSETVDDKLYIYLEYVPRTIYKLLQEYGKFGEQAIRNYTQQILSGLAYLHAKNTVHRDIKGANILVDQSGLVIKLADFGMAKHITGQSCPLSFKGSPYWMAPEVIKNSSGANLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPMIPDDLSDEGKDFVRKCLQRNPHDRPSAQQLLEHPFVKCAASLERPFLGAEALDQVSGIAHGAKSLGTGQGRNLSALDNDRLSGHSSRVLKPNPHASNEIHIPRNISCPVSPIGSPLLRSRSPQNMNGRMSPSPISSPRTLSGASTPLTGGSGAIPFGNHLKQSAYYQEGLANLPKHSNAFYNSAPAHHDSGVDIFRNLLMGSQSELIPSENDVLGKHYARPPIEPYDVQSILADRVSRQLLGDHVKINPSLDLSPNSPLLNRANGSNCTIRTIYVINMDLGDRLAGTTQSILFGFKLRHGEFRSLLVEQTKPRYETFLHDSSISAYT 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0172 958 MobiDBLite consensus disorder prediction 286 413 - -
Lele45g0172 958 ProSitePatterns Protein kinases ATP-binding region signature. 417 440 IPR017441 GO:0005524
Lele45g0172 958 SMART serkin_6 411 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g0172 958 Gene3D Transferase(Phosphotransferase) domain 1 409 687 - -
Lele45g0172 958 MobiDBLite consensus disorder prediction 101 115 - -
Lele45g0172 958 MobiDBLite consensus disorder prediction 1 254 - -
Lele45g0172 958 MobiDBLite consensus disorder prediction 9 35 - -
Lele45g0172 958 Pfam Protein kinase domain 412 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g0172 958 MobiDBLite consensus disorder prediction 167 225 - -
Lele45g0172 958 MobiDBLite consensus disorder prediction 146 160 - -
Lele45g0172 958 MobiDBLite consensus disorder prediction 749 779 - -
Lele45g0172 958 MobiDBLite consensus disorder prediction 286 339 - -
Lele45g0172 958 ProSiteProfiles Protein kinase domain profile. 411 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g0172 958 CDD STKc_MEKK1_plant 410 667 - -
Lele45g0172 958 MobiDBLite consensus disorder prediction 348 362 - -
Lele45g0172 958 SUPERFAMILY Protein kinase-like (PK-like) 409 764 IPR011009 -
Lele45g0172 958 MobiDBLite consensus disorder prediction 370 397 - -
Lele45g0172 958 MobiDBLite consensus disorder prediction 41 73 - -
Lele45g0172 958 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 60 677 - -
Lele45g0172 958 FunFam Mitogen-activated protein kinase kinase kinase 409 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0172 Lele-ChrLele45 1408338 1413522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0172 1 886 MAP Kinase Kinase Kinase AT1G63700 57.143 0.0 849
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lele45g0172 Pkinase 1.5e-71 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0172 45 1408338 1413522 Lele46g0189 46 1148127 1152778 ECH
Lele45g0172 45 1408338 1413522 Lele45g0172 45 1408338 1413522 ECH
Lele45g0172 45 1408338 1413522 Lele48g1272 48 17075628 17080568 hybridization