Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0167 ATGGCTTCAGACCTCTTGAAGCTGAAGATCTTAGAGAAAAGCCATGTGAAGCCCAAGAAGAAGCTGGGGAAGAAGGAGACTCAGCTCGTGACCTTCGATCTTCCATACCTGGCCTTCTTCTACAACCAGAAGCTTCTGTTCTACAAAGGCGATGACTTTGAGGGGATGGTGAGGAAGCTGAAAGAGGGGCTAAGTGTGGTTCTTGAAGAGTTTTATCAGCTTGCCGGGAAGCTTGGGAAGGATGAAGAAGGGGTTTTTAGAGTCGAGTATAACGACGAAGAAGAAGGTGGCTGTGTTGCCGGTATCGAGGTCGTTGAAGCTGTGGCTGAAGCTGATGTTTCAGTGGCGGATCTAACTATTGCAGAAAGCACAAACACTTTGAAGGAACTTATTCCTTATACTGGGATTCTCAATTTGGAAGGCATGCACAGGCCCTTGTTGGCGATTCAGTTAACAAAGCTAAAAGACGGATTAGCAATGGGATGTGCCTTCAACCATGCGGTCCTTGATGGAACTTCCACGTGGCACTTCATGAGCTCGTGGGCTGCGTTCTGCCGCGGCGGGCCTTCGGTTTCAGCATCACCGTTCCTTGAACGAACCAAGGCGCGAAACACGCGCGTCAAGCTCGACCTCTCACTCCCATCGGCGGACCCTCTTGCTGCAAAATCCAACGGTGATGTTAAGCAGGCCCCACCACCACCAGTTCTCAGAGAGAGGATCTTCAAGTTCTCCGAGTCAGCCATCGATAAGATCAAGTCAACGGTCAACGAAAAGCTCCCATCGGACGGTTCAAAACCATTCTCCACATTCCAAGCCCTCTCGGTCCATATCTGGCGCCACGTAACTCATGCCCGTAACCTAAAACCCGAAGACTACACTGTCTTCACCGTCTTCGTTGACTGCCGGAAACGGGTCGACCCACCGATGCCAGAGACTTATTTCGGGAACCTAATCCAGGCGATATTCACCGTTACGGCAGCCGGGTTGTTGTCTGCAAACCCGCTGGATTTCGGCGCGTCTTTGATTCAGAAGGCCATTGAAGCACACACTGCGAAGGCCATAGATGAAAGGAACAAGGAGTGGGAGAGCGCACCGAAGATTTTCCAGTTCAAAGATGCCGGCGTGAACTGCGTGGCGGTCGGAAGCTCGCCACGGTTCAAGGTTTACGACGTGGATTTCGGGTGGGGCTCGCCGGAGAATGTGAGGAGTGGATCAAACAACAAGTTCGACGGGATGATTTATCTGTATCCAGGTAAGAGTGGAGGGAGGAGCATCGACGTGGAGCTGACCTTGGAGAGTGAAGCCATGGCGAGGTTGGAGGAAGACAAGGAGTTTCTCATGGAGGTTTAA 1350 0.517 MASDLLKLKILEKSHVKPKKKLGKKETQLVTFDLPYLAFFYNQKLLFYKGDDFEGMVRKLKEGLSVVLEEFYQLAGKLGKDEEGVFRVEYNDEEEGGCVAGIEVVEAVAEADVSVADLTIAESTNTLKELIPYTGILNLEGMHRPLLAIQLTKLKDGLAMGCAFNHAVLDGTSTWHFMSSWAAFCRGGPSVSASPFLERTKARNTRVKLDLSLPSADPLAAKSNGDVKQAPPPPVLRERIFKFSESAIDKIKSTVNEKLPSDGSKPFSTFQALSVHIWRHVTHARNLKPEDYTVFTVFVDCRKRVDPPMPETYFGNLIQAIFTVTAAGLLSANPLDFGASLIQKAIEAHTAKAIDERNKEWESAPKIFQFKDAGVNCVAVGSSPRFKVYDVDFGWGSPENVRSGSNNKFDGMIYLYPGKSGGRSIDVELTLESEAMARLEEDKEFLMEV 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0167 449 Pfam Transferase family 7 445 - -
Lele45g0167 449 FunFam Tryptamine hydroxycinnamoyl transferase 221 443 - -
Lele45g0167 449 Gene3D - 217 441 IPR023213 -
Lele45g0167 449 Gene3D - 5 211 IPR023213 -
Lele45g0167 449 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 10 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0167 Lele-ChrLele45 1386412 1389051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0167 6 449 Monolignol Biosynthesis Gene Families AT5G48930 26.350 7.60e-37 138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0167 45 1386412 1389051 Lele45g0167 45 1386412 1389051 ECH
Lele45g0167 45 1386412 1389051 Lele48g1275 48 17099532 17102068 hybridization