Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0150 ATGGTCTCCAAAAACCCAAACACCCCTGAGGGCTTCTACTTGGATCCCCCTGGCATGGCGCTTCCCGGCCTTGGTCCCTTCGCCTCCGTCACTGCCGCCGCCACTGCCACGACTGCCTCCACTGCTAATTCATCGGACGACCCTTCCAAGAAGATCCGGAAACCGTACACTATAACTAAGTCCAGGGAGAGCTGGAGCGAACCCGAGCACGACAAATTCCTCGAGGCCCTGCAACTTTTTGACCGTGATTGGAAAAAGATTGAAGCATTTGTTGGATCAAAGACAGTTATACAGATACGTAGCCATGCGCAGAAATATTTTCTAAAAGTTCAGAAGAGTGGAGCAAATGAACATCTACCTCCACCCAGGCCAAAAAGAAAAGCTGCTCATCCATATCCTCAGAAAGCTTCCAAAAATGCTCTGGTTCACTCTCAAATATCAGGATCCTTTCAATCTTCATCTCCTCTGGTTGAACCTGGTTATATAATAAAGCCTGATTCCTCAGCAATGATCAAAACTCCAGTTACTAACGCTGCAGTGTCTTCTTGGTCAAACAACACCTTGCAGACGACCAATTTACTGCATGGGCCCAGAATGAATAATAGTTGCAGCAGCAGTGAAAGCACTCAGAGAGCACGGCCAATTGGTGTATCTACTGGTCAAGGAAATAATAACCATCCATTGAGAGTTCTGCCAGACTTTGCCCAAGTTTACAAGTTCATTGGCAGTGTATTTGACCCAAAAGCCACTGAGCATCTTCAGAAACTAAAAAAGATGGATCCTATAGATGTTGAGACGGTACTACTATTGATGAGAAACCTGTCTATCAATTTAGCAAGCCCAGATTTTGAGGATCATAGAAGGTTGCTCTCTTCTTATGAGGTGGAACCAGGGACAATCTAG 903 0.4574 MVSKNPNTPEGFYLDPPGMALPGLGPFASVTAAATATTASTANSSDDPSKKIRKPYTITKSRESWSEPEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKSGANEHLPPPRPKRKAAHPYPQKASKNALVHSQISGSFQSSSPLVEPGYIIKPDSSAMIKTPVTNAAVSSWSNNTLQTTNLLHGPRMNNSCSSSESTQRARPIGVSTGQGNNNHPLRVLPDFAQVYKFIGSVFDPKATEHLQKLKKMDPIDVETVLLLMRNLSINLASPDFEDHRRLLSSYEVEPGTI 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0150 300 MobiDBLite consensus disorder prediction 112 139 - -
Lele45g0150 300 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 60 109 IPR006447 GO:0003677
Lele45g0150 300 SMART sant 61 109 IPR001005 -
Lele45g0150 300 CDD SANT 64 107 IPR001005 -
Lele45g0150 300 ProSiteProfiles SANT domain profile. 60 111 IPR017884 -
Lele45g0150 300 FunFam protein REVEILLE 6 isoform X1 64 112 - -
Lele45g0150 300 Pfam Myb-like DNA-binding domain 62 107 IPR001005 -
Lele45g0150 300 Gene3D - 65 112 - -
Lele45g0150 300 PANTHER SWI/SNF COMPLEX-RELATED 30 279 - -
Lele45g0150 300 SUPERFAMILY Homeodomain-like 56 112 IPR009057 -
Lele45g0150 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 111 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0150 Lele-ChrLele45 1275803 1280029 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele45g0150 Myb_DNA-binding 9.4e-10 CL0123