Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0108 ATGACGCGAAAGTGTTCCCTCCTGGGCGGCTCTAGATATGGGATACTTCTCGTGATCTTCAGCACTGCATTATTGGGTTGGTTAAAAAAAGAAGAAATGGAAGGAAATTTATCTCAAGGAGGTATGGTTCCAGTTGGTGGTTCTTTTAGTGGTTTTGATTTGTCAGGATCAATGCGTGTTCATCAGCAAGCTGAGCACCCCCATAATATGCACCAACCTCAAACACATCTACGCCAAGGGTCCTCTGTGCATTCGGCTTGCCATGATGGTTTTCCTCTTGCCATGGGAACTTTGCAAAACTGTGATCAAACCATTTCAATGGCTGACTCTACCAAGGGAGATAGGAGCAAGAACTCAGCAAGTGAGGATGACGAACCAAGCTTGACTGAAGATGGAGCTGATGTTCGTAATGAAGCAGTCAGAGGGAAAAAGGGTTCACCTTGGCAGCGTGTGAAGTGGACTGATGAGATGGTGAAGCTTCTGATAACAGCTCTCTCTTATATAAGTGAGGATTCAATTTCTGACAGTGGTAATGGAGGAAGAAGAAAGTTTGCAGTCCTACAGAAAAAGGGTAAGTGGAAGTCAATTTCTAAGGTCATGGCTGAAAGGGGTTACCGTGTTTCACCTCAGCAATGTGAGGATAAATTCAATGATCTTAATAAAAGGTATAAAAGACTTAATGACATGATTGGGAGGGGCACCTGTTGTCAAGTTGTTGAGAACCCTGCTCTGTTGGATGTACTAGATTATCTTTCTGAGAAGGATAAGGAAGATATTCGGAAAATATTAGGCTCAAAACACCTGTTCTATGAAGAGATGTGTTCATACCATAATGGTAATAGATTGCATTTACCTCATGATCCTGTTTTGCAGCGTTCACTACAGGCAGCTCTTAGAAATAGGGATGACCATGATAATGATGATGTCAAAAGGTCCCATCATGATGATCATGAAGAAGATGATCAAGATGTGGACACTGATGATCATGATGAATTTGAAGAGACTTATGCTTCACATCAAGATAACAGAGGAGTATATGGTGCATTGGGGGGATCTGCGAAGAAATTGACACACGGTCTAGTACAAGAAGATACCAAAATGTCTGGAAACTCCTTGAATTGTCAAGACTGCAATAAAAATTCTAATTCCCATGGACCAATATTCCAATACGATGTGAAGCAAGGTTTACCTGAAGGCAATAGAGCAGCTTGGTTGCAGAAGCAATGGATTGAATCTCGTAATCTTGAGCTGGAAGAGCAGAGACTACAAATTCAGGTTGAAATGTTGGAACTGGAGAAACAGAGACTCAAGTGGCAGAGGTTTAGTAAGAAAAAGGATCGGGAATTGGAGAAACTGAGGATGGAAAATGAAAAAATGAAGCTTGAAAATGAACGTATAGCTTTGGAACTAAAGAGAAGGGAAATGGGTGCTGGCTTTAACTAG 1443 0.4151 MTRKCSLLGGSRYGILLVIFSTALLGWLKKEEMEGNLSQGGMVPVGGSFSGFDLSGSMRVHQQAEHPHNMHQPQTHLRQGSSVHSACHDGFPLAMGTLQNCDQTISMADSTKGDRSKNSASEDDEPSLTEDGADVRNEAVRGKKGSPWQRVKWTDEMVKLLITALSYISEDSISDSGNGGRRKFAVLQKKGKWKSISKVMAERGYRVSPQQCEDKFNDLNKRYKRLNDMIGRGTCCQVVENPALLDVLDYLSEKDKEDIRKILGSKHLFYEEMCSYHNGNRLHLPHDPVLQRSLQAALRNRDDHDNDDVKRSHHDDHEEDDQDVDTDDHDEFEETYASHQDNRGVYGALGGSAKKLTHGLVQEDTKMSGNSLNCQDCNKNSNSHGPIFQYDVKQGLPEGNRAAWLQKQWIESRNLELEEQRLQIQVEMLELEKQRLKWQRFSKKKDRELEKLRMENEKMKLENERIALELKRREMGAGFN 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0108 480 Coils Coil 442 474 - -
Lele45g0108 480 MobiDBLite consensus disorder prediction 299 331 - -
Lele45g0108 480 Gene3D - 153 225 - -
Lele45g0108 480 Pfam Myb/SANT-like DNA-binding domain 150 276 IPR044822 -
Lele45g0108 480 PANTHER F16F4.11 PROTEIN-RELATED 33 477 - -
Lele45g0108 480 MobiDBLite consensus disorder prediction 108 143 - -
Lele45g0108 480 Coils Coil 412 439 - -
Lele45g0108 480 MobiDBLite consensus disorder prediction 115 143 - -
Lele45g0108 480 MobiDBLite consensus disorder prediction 299 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0108 Lele-ChrLele45 982365 984292 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele45g0108 Myb_DNA-bind_4 8e-23 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0108 45 982365 984292 Lele45g0108 45 982365 984292 ECH
Lele45g0108 45 982365 984292 Lele47g1193 47 17404833 17406179 hybridization