Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0104 ATGGGTAGAAAGAAGCCGACCGCCCGTGACGATGATAACATGCCCACTGCATCTCAAGGCGGTGGAAAGTCTAAAAAGAAGGGGCTAGTGATCGATGATGATGAGTATTCTATTGGAACGGAGCTATCTGAGGAACCGCTGGCACAAGAAGAGAAGCCTGCAGCGACGGGAAAGAAGAAAGGTGAAAAAGGTAACTCGAAGGCTTCAAAAGCCGAGGACGAAGATTTAGAGAAGGCGATGGAAGATAATGATGACGATGACGATGATGTACCCGAAGTTGTGTTTACTGGGAAGAAGAAGGGGAAATCAAAAAAGGGTGATGGGAACAGTGCGTTTACTGGTTCGAGCTTTGGTTTGCTTGGTGACGAGGAGGGTGGAGAAGATGATGATGAAGACAAACAATCCGGCTTAACTGGTGGGGTGGACAATCATGACGACGAGTTTCTTAGTTTTTCAGGTAAGAAGTTCTCAAAGGGTTCCAAGAAGAAGGGTGGTAGCTTGTTCACTGCATCAGCTTTTTATGCTATAGACGAAGATGATGAAGGGGAGGTGATCGATAATTCTATGAAAGCCAGCACTGAAGAGAACGATGACATGGATGAACAAGTTATTGCTTTTACGGGTAAGAAAAAATCATCCAAAAGTAGCAAGAAGGCTGGTGCCTTATTCACTGCATCTAGTTTTGGCGATACCGAAGGAGAGCAGGACAAAAATGAACAAGAAGATGGGGATGAAGATGTTGCTCTGATCACTTTCTCAGGGAAGAAAAAGAAGTCATCGAAGTCTTCCAAGAAGGCTGTTAATTCATTTAGTGCAGCTTTTGCTGAAGAGGATGTGGATGATGATGATTCTGTGCTGGAGTCTTCTAGAGCCGATGAAGAAAAGGCTGAGGACGAAGATGTTTCTGTTGTATTTTCAGGTAAGAAGAAGTCTTCCAAGAAAAACAAGACCGCTACTACCAAAGCTAGTGATGATTTTGAAACTGCCAATGAAGAGCAACTTAGCGTAATAGACAACAATAAAGGTAATAAGAGTGAAGAGGTTATTGAAAATTCGAAAAATAAAAAGAAGAAGAATAAAAAGAGTGGAAGAACTGCTCAAGAAGAGGAAGATTTGGACAAGCTTCTTGCTGAGCTTGGGGAGGGGCCTCCAGTAAAATCTGCTTCCCCTCCAGCAGAGGATGACAAAGTTCTGGCTTCTTCTGAAGTAGCTGCTCCTGCTATTGCTGTGGTGAAAAAAGGAGGGGAAGAAGAGACCACGGAGTCAGCTGCTGCAAAAAAGAAGAAGAAGAATAAAAAGAGTGGAAGGACTGCTCAAGAAGAGGAAGATTTGGACAAGCTTCTAGCTGAGCTTGGGGAGGGGCCTCCAGTAAAATCTGCCTCCCCTCCAGCAGAGGATGATAAAGTTCAAGCCTCTTCTGAAGTAGCTGCTCCTGCTACTGCTGTGGTGGACAAAGACGGGGAAGAAGAGACAATGGAGTCAGCTGCTGCAAAAAAGAAGAAAAAGAAAAAGGAAAAGGAAAAGGAGAAGAAGGCTGCAGCGGCAGCAGCAGCTGCAACTGCCCCTGATAATGAAAAGAATGAAGAAGTTAAACCCGATACCTCAGAATCGAAGAAGAGTGATTCCAAGACTAAAGCGGCTGACAAGAAAGTGCCAAAGCATGTTAGGGAGATGCAAGAGGCCCTGGCCCGAAGAAAAGAGGCTGAAGAGAGGAAGAAAAGGGAAGAGGAGGAGAGGCTAAGGAAGGAAGAAGAAGAGCGGCGTAGGCAAGAGGAACTTGAGAGGCAAGCAGAAGAGGCACGACGTAAGAAGAAGGAGAGGGAGAAGGAGAAGCTCCAGAAGAAGAAGCAAGAAGGCAAATTGTTAACTGGTAAGCAAAAGGAAGAAGCTCGTCGTTTGGAGGCCATGAGGAAGCAGTTTCTTTCTGGTACAGGGGGTGTCACACTTCCTACTGGGGAGTCTGGTGCACCGGCCAAACGACCCATATATCAGACAAAGAAGTCAAAACAAACTCATCATCACCAGAATGACTCTGCCCCTGTTAAGGCAGATGAAGATGTGGAAGCAAAGGAAAATCTGGCGATCACTCGTGATGCAGAGTCATTGGAACCAGAGAAGGTTGAAGTGGTTGAATCAGTGCAGGATGAGGACAAAGTTAAACCGTCTGAAGATGTTCAAGAGGAAGAAGTTGAAGAGGATAATGAGGATGAATGGGATGCAAAGAGTTGGGATGATGTTAATTTAAATGGAAAAGGTGCATTTGCTGATGAGGAGGCTGACTCTGAACCAGAACCTGTAGTGAAAAAGGAGATAAAAAATGCTGCTGTTGCACCTCCAGCTGTTGTCAAGTCAACTGGCACAACCAAGAAAGCTGCTTCTCAGCCTCCAACTGAGCAAATCGAAAGTAAAAAGCAGGTTGAGAAGCAACCCCCTAAGCCGGATGGGCATCTACCACCAAATTCAGCTGTGCCTTCTCAGCCAAGTGGAGAGAACCTTCGTTCCCCAATTTGCTGTATTATGGGCCATGTGGACGCTGGTAAAACTAAGCTGTTGGATTGTATTCGATGTACTAATGTTCAGGAAGGTGAGGCTGGTGGCATCACGCAACAGATTGGTGCTACATACTTTCCTGCCGAGAACATACGTGAAAGAACAAAGGAACTAAAAGCTGATGCGAAGCTGAAAGTTCCAGGTCTACTGGTGATAGATACTCCTGGGCATGAATCTTTTACTAACTTAAGGTCAAGGGGTTCAGGTCTATGTGATATTGCAATTCTAGTTGTTGACATTATGCATGGATTACAACCTCAGACAATAGAATCGCTCAATCTGTTGAAAATGAGGAATACAGAATTCATAGTTGCATTGAACAAAGTTGACAGACTTTATGGTTGGAGAGCATGCACTAATTCTCCAATTGTTAAGGCAATGAAGCAGCAAACCAAGGATGTGCAAAATGAGTTCAATATGAGAGTTACTCAGACTATCACTCAATTCAAGGAACAGGGGTTAAACACTGAGTTGTACTATAAAAACAAGGAAATGGGAGAAACCTTCAGTATTGTACCTACCAGTGCTACAAGTGGTGAAGGTATCCCGGATTTGTTATTGTTGTTGGTTCAATGGACACAAAAAACAATGGCTCAGCAACTTACATACAGTGATGAAGTGCAGTGTACAGTTTTGGAGGTTAAGGTTGTTGAAGGTCATGGGACAACTATTGATGTTGTCTTGGTTAATGGTGTTCTTCATGAAGGAGAACAAATAGTTGTATGTGGAATGCAGGGGCCTATTGTTACTACAATTCGAGCTCTATTGACACCTCATCCTATGAAGGAGCTCCGTGTTAAGGGCACATATCTCCATCATAAAGAAATTAAGGCAGCTATGGGTATCAAAATCACTGCCCAGGGGCTTGAACATGCTATTGCTGGCACTGCTTTACATGTGGTGAAGCCTGACGATGATTTAGAAGAAGTTAAAGAAGCAGCTATGGAAGATATGGAGACGAAGGATCCAATTGTTTTGGGGGTTGATATTCTTGAAGGTGTTTTAAAGGTTGGAACTCCAATTTGTATTCCTTCCAGAGATTACATTGATATTGGTCGCATTGCATCCATTGAAAATAACAAAAAACCTGTTGATTATGCCAAGAAAGGGCAGCAAGTAGCCATTAAGATTGTCGGCAGCAATTCGGAGGAACAACAAAAAATGTACGGGAGGCATTTTGAGATCGATGACGAACTTGTAAGCCATATCACAAGGAGATCTATCGATATTCTCAAAACTAATTATCGGGATGAACTGACTATGGAGGAATGGAGGCTGGTTGCGAAATTGAAAAATGTTTTCAGGATACAATGA 3864 0.4366 MGRKKPTARDDDNMPTASQGGGKSKKKGLVIDDDEYSIGTELSEEPLAQEEKPAATGKKKGEKGNSKASKAEDEDLEKAMEDNDDDDDDVPEVVFTGKKKGKSKKGDGNSAFTGSSFGLLGDEEGGEDDDEDKQSGLTGGVDNHDDEFLSFSGKKFSKGSKKKGGSLFTASAFYAIDEDDEGEVIDNSMKASTEENDDMDEQVIAFTGKKKSSKSSKKAGALFTASSFGDTEGEQDKNEQEDGDEDVALITFSGKKKKSSKSSKKAVNSFSAAFAEEDVDDDDSVLESSRADEEKAEDEDVSVVFSGKKKSSKKNKTATTKASDDFETANEEQLSVIDNNKGNKSEEVIENSKNKKKKNKKSGRTAQEEEDLDKLLAELGEGPPVKSASPPAEDDKVLASSEVAAPAIAVVKKGGEEETTESAAAKKKKKNKKSGRTAQEEEDLDKLLAELGEGPPVKSASPPAEDDKVQASSEVAAPATAVVDKDGEEETMESAAAKKKKKKKEKEKEKKAAAAAAAATAPDNEKNEEVKPDTSESKKSDSKTKAADKKVPKHVREMQEALARRKEAEERKKREEEERLRKEEEERRRQEELERQAEEARRKKKEREKEKLQKKKQEGKLLTGKQKEEARRLEAMRKQFLSGTGGVTLPTGESGAPAKRPIYQTKKSKQTHHHQNDSAPVKADEDVEAKENLAITRDAESLEPEKVEVVESVQDEDKVKPSEDVQEEEVEEDNEDEWDAKSWDDVNLNGKGAFADEEADSEPEPVVKKEIKNAAVAPPAVVKSTGTTKKAASQPPTEQIESKKQVEKQPPKPDGHLPPNSAVPSQPSGENLRSPICCIMGHVDAGKTKLLDCIRCTNVQEGEAGGITQQIGATYFPAENIRERTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLQPQTIESLNLLKMRNTEFIVALNKVDRLYGWRACTNSPIVKAMKQQTKDVQNEFNMRVTQTITQFKEQGLNTELYYKNKEMGETFSIVPTSATSGEGIPDLLLLLVQWTQKTMAQQLTYSDEVQCTVLEVKVVEGHGTTIDVVLVNGVLHEGEQIVVCGMQGPIVTTIRALLTPHPMKELRVKGTYLHHKEIKAAMGIKITAQGLEHAIAGTALHVVKPDDDLEEVKEAAMEDMETKDPIVLGVDILEGVLKVGTPICIPSRDYIDIGRIASIENNKKPVDYAKKGQQVAIKIVGSNSEEQQKMYGRHFEIDDELVSHITRRSIDILKTNYRDELTMEEWRLVAKLKNVFRIQ 1287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0104 1287 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 832 1048 IPR000795 GO:0003924|GO:0005525
Lele45g0104 1287 FunFam eukaryotic translation initiation factor 5B 1055 1172 - -
Lele45g0104 1287 Coils Coil 485 517 - -
Lele45g0104 1287 MobiDBLite consensus disorder prediction 92 106 - -
Lele45g0104 1287 MobiDBLite consensus disorder prediction 45 76 - -
Lele45g0104 1287 FunFam Eukaryotic translation initiation factor 5B 826 1054 - -
Lele45g0104 1287 MobiDBLite consensus disorder prediction 188 207 - -
Lele45g0104 1287 PRINTS GTP-binding elongation factor signature 836 849 IPR000795 GO:0003924|GO:0005525
Lele45g0104 1287 PRINTS GTP-binding elongation factor signature 900 910 IPR000795 GO:0003924|GO:0005525
Lele45g0104 1287 PRINTS GTP-binding elongation factor signature 916 927 IPR000795 GO:0003924|GO:0005525
Lele45g0104 1287 PRINTS GTP-binding elongation factor signature 952 961 IPR000795 GO:0003924|GO:0005525
Lele45g0104 1287 MobiDBLite consensus disorder prediction 188 766 - -
Lele45g0104 1287 MobiDBLite consensus disorder prediction 524 636 - -
Lele45g0104 1287 MobiDBLite consensus disorder prediction 786 800 - -
Lele45g0104 1287 Pfam Elongation factor Tu domain 2 1071 1148 IPR004161 GO:0005525
Lele45g0104 1287 SUPERFAMILY Translation proteins 1171 1286 IPR009000 -
Lele45g0104 1287 Gene3D Translation factors 1169 1287 - -
Lele45g0104 1287 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 833 1123 IPR027417 -
Lele45g0104 1287 MobiDBLite consensus disorder prediction 670 725 - -
Lele45g0104 1287 MobiDBLite consensus disorder prediction 779 830 - -
Lele45g0104 1287 Gene3D Translation factors 1055 1168 - -
Lele45g0104 1287 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 516 1169 IPR015760 -
Lele45g0104 1287 MobiDBLite consensus disorder prediction 1 165 - -
Lele45g0104 1287 MobiDBLite consensus disorder prediction 483 500 - -
Lele45g0104 1287 Gene3D - 827 1054 IPR027417 -
Lele45g0104 1287 MobiDBLite consensus disorder prediction 77 91 - -
Lele45g0104 1287 Coils Coil 551 622 - -
Lele45g0104 1287 MobiDBLite consensus disorder prediction 288 307 - -
Lele45g0104 1287 MobiDBLite consensus disorder prediction 726 740 - -
Lele45g0104 1287 CDD aeIF5B_II 1056 1166 - -
Lele45g0104 1287 MobiDBLite consensus disorder prediction 434 449 - -
Lele45g0104 1287 Pfam Elongation factor Tu GTP binding domain 836 1044 IPR000795 GO:0003924|GO:0005525
Lele45g0104 1287 MobiDBLite consensus disorder prediction 362 377 - -
Lele45g0104 1287 CDD IF2_eIF5B 835 1045 - -
Lele45g0104 1287 TIGRFAM small_GTP: small GTP-binding protein domain 837 962 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0104 Lele-ChrLele45 953764 961716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0104 1 42 Eukaryotic Initiation Factors Gene Family AT1G76810 67.391 3.34e-07 53.1