Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0083 ATGCATGGCGAGCTCGTGAGGTTCACGGCAGAACGCGGCGGCGACGAGGGAAACACTGACTACAGTCAGTCGCAGTCAGCAGGATCTAACCAAGCTGAAGAGGTGGCAGTAACGACGACCATGGCGGCTGAACCAGTGGAACCTGTGATGTCAGGGTATGGCAGAGCCGGAGAGTTGTCGGCGATGGTTTCGGCGCTTACGCATGTGGTGTCGTCAGGTTCTTCTGGACACACAGACGCTGATGAATGGATCCAAGGAATTACTGGTTTTCCTATGATGTCACCCTTTGGCCATGTTTCGTCTCCTTTGTCTCTTTCTTCATCTTCTTCAGGTCCCCATATGATCTCTGCCTCTGGTTCATGGGTCGGTCAGAAAAGAGGCCGTCAAGAAGAAGAAGAAGAAGCTCTATACAAAGCCGCCATTGGCGACTTCACTGCACCATTACAGAACGAGTCAGCTTCCTCAGCAGTGACGGAGGTGGAAGCTTCGAATATAGCTACCACTGATGCAACGGCGGTGGCGGCTGCCGTGACTGTACCGGTGATGCCATCGGGTGAAACTGGTTCGTATGAAGAAACAGGGGAGAGAAGGAGGAGGTACAGAGGAGTGAGGCAGAGGCCGTGGGGTAAGTGGGCGGCGGAGATTCGCGACCCCCACAAGGCGGCAAGGGTCTGGCTCGGCACGTTCGACACGGCGGAGGCGGCCGCCAGAGCTTATGACGAAGCCGCATTGAGGTTCAGAGGTAGCAGAGCCAAACTAAACTTTCCGGAAAACGTCAGAGCAGTCCCGGTACCAGTTCAAAATTTTCCGGCCACCAGCCACGTCCTTCAGCAGTCCCCGGCGGCGCTTCCGTTCATGCAGGCGTCAGCTTATCAGGGGCCCACTGATTTGGTCAGAGACTATTGGAATTACTCCCATCTTCTACAGAGCGCCGGCGACTTCCAAGGTCAACGGCCGCTACAGCTGCCGCAACAGATACCGCCGAGTTTGGTGCAGCAATGGCTCTATAATTCTCAATCGAGTGCTCTTCAATCTTCTTCTTCGGTGTTTTCACCAGCATCATCGTTTTCTTCTTCATCTCCCACTGCATTTTCGCCTTCTAGTCAGTTATCCTCTGCTTCATTTCCCCTGCCTTCTGGTCAGCAAATAGGCTATTTCCGACCACCGGGAAACCAGACTCACGGCGGAGAAAGCTCAAATTTTCCGACGTCAACATGGTCAGACAGCAGTAACTTTCCACCGGCGTCTAGGTGA 1254 0.5415 MHGELVRFTAERGGDEGNTDYSQSQSAGSNQAEEVAVTTTMAAEPVEPVMSGYGRAGELSAMVSALTHVVSSGSSGHTDADEWIQGITGFPMMSPFGHVSSPLSLSSSSSGPHMISASGSWVGQKRGRQEEEEEALYKAAIGDFTAPLQNESASSAVTEVEASNIATTDATAVAAAVTVPVMPSGETGSYEETGERRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEAAARAYDEAALRFRGSRAKLNFPENVRAVPVPVQNFPATSHVLQQSPAALPFMQASAYQGPTDLVRDYWNYSHLLQSAGDFQGQRPLQLPQQIPPSLVQQWLYNSQSSALQSSSSVFSPASSFSSSSPTAFSPSSQLSSASFPLPSGQQIGYFRPPGNQTHGGESSNFPTSTWSDSSNFPPASR 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0083 417 SUPERFAMILY DNA-binding domain 199 257 IPR016177 GO:0003677
Lele45g0083 417 CDD AP2 207 258 IPR001471 GO:0003700|GO:0006355
Lele45g0083 417 MobiDBLite consensus disorder prediction 16 37 - -
Lele45g0083 417 Gene3D AP2/ERF domain 198 258 IPR036955 GO:0003700|GO:0006355
Lele45g0083 417 SMART rav1_2 199 262 IPR001471 GO:0003700|GO:0006355
Lele45g0083 417 MobiDBLite consensus disorder prediction 1 37 - -
Lele45g0083 417 FunFam Ethylene-responsive transcription factor 2 198 257 - -
Lele45g0083 417 PRINTS Ethylene responsive element binding protein signature 200 211 IPR001471 GO:0003700|GO:0006355
Lele45g0083 417 PRINTS Ethylene responsive element binding protein signature 222 238 IPR001471 GO:0003700|GO:0006355
Lele45g0083 417 MobiDBLite consensus disorder prediction 361 417 - -
Lele45g0083 417 ProSiteProfiles AP2/ERF domain profile. 199 256 IPR001471 GO:0003700|GO:0006355
Lele45g0083 417 Pfam AP2 domain 199 248 IPR001471 GO:0003700|GO:0006355
Lele45g0083 417 PANTHER DNA-BINDING DOMAIN 156 351 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0083 Lele-ChrLele45 824065 825841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0083 191 274 AP2-EREBP Transcription Factor Family AT2G33710 71.429 9.28e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele45g0083 AP2 8.5e-15 CL0081