Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0080 ATGTCAAATGTGGATACTGAGGGGGGATTGCAATATACCTATGACAGTCATCTAAGCAGTCGTTCAAATTCAGTCCTTAGACATCGAAATGGTAGCTATTTCTTGGTTTTCGCCCCATTTTCGTTTTCTGTGTCCAGGTCTATTCCAATTACTGCACATGTTATGTTATATTTGAGTCAAGTGACATGGAAGCTGTTGATTTTGAAGGATCCTCATGTTGAAGAGTTGCCTCAATACATACATATAACGCAAAATGAATTTTTGAATAGAAGGCATGTGAAGCAGAAGGAGGAGGATATTGCAATATGTGAATGCAAATATGATGCTAGTGATCCTGATAGTGCATGTGGGGATGGGTGTCTTAACGTATTGACCAGCTCTGAATGCACCCTTGGCTATTGCTCGTGTGGCATCTTTTGCAAAAATCAGAGATTTCAGAAGTGTGAATATGCAAAAACAAAGTTGTTCAAAACTGAAGGCCGGGGATGGGGTCTTTTGGCTGATGAGAACATTAAGGCAGGCCAATTTATTATCGAATACTGTGGAGAAGTAATTTCATGGAAAGAAGCCAAGCGAAGAGCCCAGGCTTATGAAACTCAAGGTCTAAAGGATGCATTCATTATTTGTCTTAATGCCTCTGAATCAATTGATGCAACTAGAAAGGGAAGCCTTGGTAGATTTATAAATCATTCATGTCAGCCAAATTGTGAGACAAGGAAATGGAATGTCTTGGGTGAGATAAGAGTTGGGATATTTGCAAAACAAGATATACCTGTTGGAGCTGAACTGGCATATGATTATAATTTTGAATGGTTTGGTGGCACAAAGGTTCGTTGCCTTTGTGGTGCAGCCATATGTTCTGGATTCCTTGGAGCAAAATCTCGTGGTTTTCAGGAAGATACATATTTATGGGAAGATGATGATGAAAGGTACACTGTTGAGAAAATTCCAGTATATGACTCCGCAGAGGATGAGCCTCCCTCAAAGGTCCTTAGAAGCTTACATTCTGACATTCCTGGTATGCAAGTTAATGGAAAAACCGAACACTCCATGGACGTTGTCATAAAACATGAACAGCTATCAGAATCAACTGCTTTTAGCATTCAGCCGCTTGCATCAGTTCCAACAAAGGGTTTACATGTCAGTTCGATAAAATCTGAAATAGAAAATGATGACGATATGAAGTTGTACTCTAGAGCTACTCAGCAGGCCTTTCCACAAAACAATGCAATGATATCACGAATCAGAAGTAATACCGCAGCCCGAAACTATCGCATTGAACCTAGGTCCGTATCTGCCAAAAAATCTAAGAAATTTGACGGAAGGTTTAAAAATATCACACAAAAGCAAGTCGATGTGAAGTCTGCTGCTGAATATTTAGCATCAAAAGAAGCACAAGAGGAGATTTTAAGATATGAGGAAATGAAGAATGAGGCGACTTGTGGTCTTGATAAGTTATACAACGAAATACGACCAGCCATTGAAGAACATGAGAGGGATAGCCAAGACAGTGTATCCACGAGTGTAGCAGAGAAGTGGATTGAAGCTTGCTGTTCAAAATTGAAGGCGGAGTTTGACCTTTACTCCTCCATTGTCAAGAATTTTGCCTGCACTCCTCTCAAGCCTCGTGGCCTTCCAAATCCTCCTTCTTCTCAAGTTGATAATGAAAACGAAAATAAGTTGTGTACGAATTGA 1695 0.4006 MSNVDTEGGLQYTYDSHLSSRSNSVLRHRNGSYFLVFAPFSFSVSRSIPITAHVMLYLSQVTWKLLILKDPHVEELPQYIHITQNEFLNRRHVKQKEEDIAICECKYDASDPDSACGDGCLNVLTSSECTLGYCSCGIFCKNQRFQKCEYAKTKLFKTEGRGWGLLADENIKAGQFIIEYCGEVISWKEAKRRAQAYETQGLKDAFIICLNASESIDATRKGSLGRFINHSCQPNCETRKWNVLGEIRVGIFAKQDIPVGAELAYDYNFEWFGGTKVRCLCGAAICSGFLGAKSRGFQEDTYLWEDDDERYTVEKIPVYDSAEDEPPSKVLRSLHSDIPGMQVNGKTEHSMDVVIKHEQLSESTAFSIQPLASVPTKGLHVSSIKSEIENDDDMKLYSRATQQAFPQNNAMISRIRSNTAARNYRIEPRSVSAKKSKKFDGRFKNITQKQVDVKSAAEYLASKEAQEEILRYEEMKNEATCGLDKLYNEIRPAIEEHERDSQDSVSTSVAEKWIEACCSKLKAEFDLYSSIVKNFACTPLKPRGLPNPPSSQVDNENENKLCTN 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0080 564 Gene3D SET domain 65 305 IPR046341 -
Lele45g0080 564 PANTHER SET DOMAIN PROTEINS 73 518 - -
Lele45g0080 564 MobiDBLite consensus disorder prediction 543 564 - -
Lele45g0080 564 SUPERFAMILY SET domain 76 288 IPR046341 -
Lele45g0080 564 SMART shorttest3 98 150 IPR006560 GO:0005634|GO:0018024
Lele45g0080 564 ProSiteProfiles SET domain profile. 151 268 IPR001214 GO:0005515
Lele45g0080 564 Pfam SET domain 162 268 IPR001214 GO:0005515
Lele45g0080 564 ProSiteProfiles Post-SET domain profile. 275 291 IPR003616 -
Lele45g0080 564 SMART set_7 151 274 IPR001214 GO:0005515
Lele45g0080 564 MobiDBLite consensus disorder prediction 548 564 - -
Lele45g0080 564 Pfam AWS domain 111 148 IPR006560 GO:0005634|GO:0018024
Lele45g0080 564 FunFam Histone-lysine N-methyltransferase 66 303 - -
Lele45g0080 564 ProSiteProfiles AWS domain profile. 98 149 IPR006560 GO:0005634|GO:0018024
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0080 Lele-ChrLele45 796979 801383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0080 133 290 C2H2 Transcription Factor Family AT2G23740 33.708 1.37e-20 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele45g0080 SET 8.5e-19 No_clan