Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0079 ATGGCTTGTGCTGCTATTAGAAGCGTTTTTATTGTTCTTGTATTGTCTTGCGCTGGCCAAGCTGCTGGCTTGCTTCGCCTTCATTTCCATGACTGCGTTGTTCAGGTAGGAGGACCAAAATACGACATTCCCTTGGGAAGACGAGACGGTTTAACCTTTGCCTCAAGAAACGTCACTTCGGATAACCTTCCGCCACCCACCAGCAGCGCCGTCGCCATCCTCTCTTCTCTCGCCACCAAGAACCTCAACCCCACCGACGTCGTCGCCCTCTCTGGCGGCCACACCATGGGCATCAGCCCCTGCACCTCCTTCACCGACCGTCTCTACCCTACTCAGGACCCCGTCATGGACAAGACCTTCGCTGGAAGCCTCAAGCGAACGTGCCCCACTGCAACCACCGACAACACCACTGTGCTTGACATCAGGAGTCCGAACCGGTTCGACAACAAGTACTATGTTGAACTCATGAACCGGCAGGGGCTGTTTAACTCGGATCAGGATCTGTACACAAGTAAGAGGACGAAGGGAATAGTGATTAGCTTCACAGTGGACCAGAAGCTGTTCTTCGAGAAGTTCGTTGAGGCTATGTTGAAGATGGGTCAACTCAGCGTTCTGACTGGTACACAAGGGGAGATTCGAGCCAAGTGCTCCGTGAAGAAAAAGGATAACGCATCACTCTTGGCGCCTGTCGTTGAGGATGTTTTGGAAGCAGATTTGCTGAATATGTGA 729 0.524 MACAAIRSVFIVLVLSCAGQAAGLLRLHFHDCVVQVGGPKYDIPLGRRDGLTFASRNVTSDNLPPPTSSAVAILSSLATKNLNPTDVVALSGGHTMGISPCTSFTDRLYPTQDPVMDKTFAGSLKRTCPTATTDNTTVLDIRSPNRFDNKYYVELMNRQGLFNSDQDLYTSKRTKGIVISFTVDQKLFFEKFVEAMLKMGQLSVLTGTQGEIRAKCSVKKKDNASLLAPVVEDVLEADLLNM 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0079 242 Pfam Peroxidase 33 182 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele45g0079 242 ProSitePatterns Peroxidases proximal heme-ligand signature. 86 96 IPR019793 -
Lele45g0079 242 ProSitePatterns Peroxidases active site signature. 21 32 IPR019794 GO:0004601
Lele45g0079 242 ProSiteProfiles Plant heme peroxidase family profile. 22 220 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele45g0079 242 FunFam Peroxidase 64 199 - -
Lele45g0079 242 PANTHER PEROXIDASE 72-RELATED 35 217 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele45g0079 242 Gene3D Peroxidase, domain 2 65 200 - -
Lele45g0079 242 SUPERFAMILY Heme-dependent peroxidases 5 218 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele45g0079 242 PRINTS Haem peroxidase superfamily signature 1 6 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele45g0079 242 PRINTS Haem peroxidase superfamily signature 86 101 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele45g0079 242 PRINTS Haem peroxidase superfamily signature 140 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele45g0079 242 PRINTS Plant peroxidase signature 37 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele45g0079 242 PRINTS Plant peroxidase signature 194 207 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele45g0079 242 PRINTS Plant peroxidase signature 85 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele45g0079 242 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele45g0079 242 PRINTS Plant peroxidase signature 154 171 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele45g0079 242 Gene3D - 33 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0079 Lele-ChrLele45 794255 795698 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0079 14 237 Peroxidase AT1G71695 59.821 8.30e-93 275