Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0078 ATGGCTAACTCATCCCTTTACTCTCTGCTCTTCATCTCTTGCCTTGTCTTCGCCTCCCACTTCTCTGCCACCAAGGCACAGTCCAAGCCCCCCATCGTCAAGGGCCTCTCTTGGACCTTCTACGAATCTAGCTGCCCTAGCGTCGAATCCATCGTCACTAAACACCTCAAATCTGTCTTCAAGAAGGACATCGGCCAAGCCCCCGCCTTGCTCCGCATCTTCTTCCACGATTGCTTCGTCCAGGGCTGTGATGGGTCCATTTTGTTGGACGCCATTCCTCCGAGCAACCAGAGTGAGAGAGACTCCAGATCCAACGGTGGCATCAGACCTGAGGCCATTAAGACCATCGACGATATTAGAGAGCTCGTCCACAAGAAATGTGGCAGAGTTGTCTCCTGTGCTGACATCGTCGCTCTCGCCGGACGTGATGCTGTCGTCCTGGCAGGAGGGCCCAGCTTCCCAGTTCCACTAGGAAGACGAGACGGTCTAACCTTAAACTTCGACGAAACAACCAACCTCCCGTCTCCCTTCGCCAACACCACCGGCACCATCAACACCTTCTCCCCCCAGTTTGATGTCACCGACGTGGTCGCTCTCTCCGGTGCCCACACCTACGGGCGATCCCACTGCAGCTCCTTCTCCGACCGGGTCTCCGGCACGAGCCCGGCTCCCATCGACCAGACTCTCTTGAAGAACCTCAAGGCCACTTGTCCCAGCGCGACATCACCCAACACGGCAAACCTCGACATCCGAACTCCGAACAAGTTCGACAACAAGTACTACATCGACCTGATGAACCGACAGGGAGTGTTCACCTCGGATCAGGACCTGTTTTCCGATGCTCGGACCAAGAAGTTGGTGCAGAGCTTTGCCCTGGACGAGAAGTTGTTCTTCGAGAAGTTCACAAATGCGATGATAAAGATGAGTCAGCTTAGGGTTTTGACAGGGAAGCAAGGTGAGATTAGAGCCAAGTGTAATCTGAGGAACAGTGCCAAGAAGTCTATATTGGCTTCTGTGGTGGACAAGGTGGTTGAAGTGGCCGAACAGTTCTAG 1053 0.5432 MANSSLYSLLFISCLVFASHFSATKAQSKPPIVKGLSWTFYESSCPSVESIVTKHLKSVFKKDIGQAPALLRIFFHDCFVQGCDGSILLDAIPPSNQSERDSRSNGGIRPEAIKTIDDIRELVHKKCGRVVSCADIVALAGRDAVVLAGGPSFPVPLGRRDGLTLNFDETTNLPSPFANTTGTINTFSPQFDVTDVVALSGAHTYGRSHCSSFSDRVSGTSPAPIDQTLLKNLKATCPSATSPNTANLDIRTPNKFDNKYYIDLMNRQGVFTSDQDLFSDARTKKLVQSFALDEKLFFEKFTNAMIKMSQLRVLTGKQGEIRAKCNLRNSAKKSILASVVDKVVEVAEQF 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0078 350 CDD secretory_peroxidase 35 326 IPR033905 GO:0004601|GO:0042744
Lele45g0078 350 ProSiteProfiles Plant heme peroxidase family profile. 35 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele45g0078 350 Pfam Peroxidase 53 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele45g0078 350 FunFam Peroxidase 39 186 - -
Lele45g0078 350 PRINTS Haem peroxidase superfamily signature 67 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele45g0078 350 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele45g0078 350 PRINTS Haem peroxidase superfamily signature 131 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele45g0078 350 PRINTS Haem peroxidase superfamily signature 149 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele45g0078 350 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele45g0078 350 SUPERFAMILY Heme-dependent peroxidases 31 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele45g0078 350 FunFam Peroxidase 174 308 - -
Lele45g0078 350 ProSitePatterns Peroxidases active site signature. 67 78 IPR019794 GO:0004601
Lele45g0078 350 Gene3D Peroxidase, domain 2 175 309 - -
Lele45g0078 350 PANTHER - 15 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele45g0078 350 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele45g0078 350 PRINTS Plant peroxidase signature 111 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele45g0078 350 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele45g0078 350 PRINTS Plant peroxidase signature 45 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele45g0078 350 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele45g0078 350 PRINTS Plant peroxidase signature 130 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele45g0078 350 PRINTS Plant peroxidase signature 149 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele45g0078 350 PRINTS Plant peroxidase signature 69 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele45g0078 350 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele45g0078 350 Gene3D - 39 326 - -
Lele45g0078 350 ProSitePatterns Peroxidases proximal heme-ligand signature. 195 205 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0078 Lele-ChrLele45 789868 791136 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0078 6 347 Peroxidase AT1G71695 53.333 5.42e-125 361