Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0068 ATGGGCACCTTCTTACTGATGTTCGCGGCATCGGCGGGACCAATCCTGAATCAGAAATACAACGGAGCAGAGAGCCTGATCGGCAACGCTGCCTGTGCCGGCTTAGGTGTCATGATCATAATCTTGTCCACCGGCCACATTTCCGGCGCTCACCTCAACCCTTCCCTCACCATCGCCTTCGCCACCTTCCGCCACTTCCCCTGGATCCACGTCCCCGCCTACATCTCCGCTCAGGTCGTCGCCTCCATCTGCGCCTCCTTCGCCCTCAAGGGCATCTTCCATCCTTACATGTCCGGCGGCGTTACGATTCCTTCCGTGAGTACCACCGTTGGCCAGGCTTTTGCTCTCGAGTTCATCATCACTTTCAATCTCCTCTTCGTTGTCACTGCTGTCGCCACTGATAGCCGTGCTGTTGGGGAATTGGCTGGGATTGCTGTTGGAGCCACCGTTTTGCTCAACATTCTCATATCTGGGCCGGCAAGTGGCGGTTCAATGAACCCGGTTCGCACCTTGGGTCCGGCCGTGGCTGCAGGAAACTACAAGCACCTATGGATATATCTGGTTGCACCCACCCTCGGAGCTCTCGCCGGTTCCGGTGTTTATACTCTCGTCAAGCTCCGCGACAGCGAGGCCGATCCACCACGCCAGGTTCGGAGCTTCCGTCGCTAG 669 0.5785 MGTFLLMFAASAGPILNQKYNGAESLIGNAACAGLGVMIIILSTGHISGAHLNPSLTIAFATFRHFPWIHVPAYISAQVVASICASFALKGIFHPYMSGGVTIPSVSTTVGQAFALEFIITFNLLFVVTAVATDSRAVGELAGIAVGATVLLNILISGPASGGSMNPVRTLGPAVAAGNYKHLWIYLVAPTLGALAGSGVYTLVKLRDSEADPPRQVRSFRR 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0068 222 Gene3D Glycerol uptake facilitator protein. 1 216 IPR023271 -
Lele45g0068 222 PANTHER AQUAPORIN NIP2-1 1 210 IPR034294 -
Lele45g0068 222 Pfam Major intrinsic protein 1 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele45g0068 222 ProSitePatterns MIP family signature. 51 59 IPR022357 -
Lele45g0068 222 PRINTS Major intrinsic protein family signature 147 169 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele45g0068 222 PRINTS Major intrinsic protein family signature 33 57 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele45g0068 222 PRINTS Major intrinsic protein family signature 184 204 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele45g0068 222 PRINTS Major intrinsic protein family signature 116 134 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele45g0068 222 PRINTS Major intrinsic protein family signature 70 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele45g0068 222 SUPERFAMILY Aquaporin-like 1 212 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0068 Lele-ChrLele45 725090 725952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0068 1 222 Major Intrinsic Protein MIP AT4G10380 82.432 3.56e-132 372