Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0055 ATGGGTTTTGAATCAGACTCCGAGTGTTTCAGCAAAATGATGGCTTCGATGCCGGGGTTTCGCTTCCACCCGACGGACGAGGAGCTAATCATGTATTATCTGAAGAGGAAGATGTCTGGGAGGAAGTTGAAGCTCGACGTGATCCGGGAGACTGACGTCTACAAGTGGGACCCTGAGGAATTGCCTGCGCAATCTGGACTAAAAACTGGAGATAGACAATGGTTTTATTTCAGTCCTAGAGATAGGAAGTACCCTAATGCTGCAAGGTCGAGTAGAGCAACAAGACATGGGTACTGGAAAGCTACAGGAAAAGATCGTAATGTGATATACACTTCCCGAACCGTTGGAGTTAAAAAGACACTGGTTTTCTATAAAGGCAGAGCGCCTAATGGTGAACGCACTGATTGGGTTATGCATGAGTACACCTTGGATGAACAAGAGCTTCAAAGATGCCAAGGCATTAAGGACTATTTTGCACTCTACAAGCTTTACAGGAAAAGCGGACCTGGCCCTAAAAACGGTGAGCAGTATGGTGCACCATTTAATGAAGAAGAGTGGGCAGATGACGATTTTGTAGATTGCAATGTAAACTCAGCTGACACTGAAGTTCCAACACAGCAACGTGATGGTGTTACTTCGGTTGATACTGTCAATGTTAATGATCCAGTGCAGCCATTGCTTGATGATGAAATTGAGGAGATCCTGAAGAAACTTATGGATGACGAGTCCCTCCACGAACAACAAAATGTGAACAGTCATCCTGCCTTACATCTGGGGGTTGCTGAGGAAATGCAGAATGACGCGGTTAATCGATTCTGTAGGGAAGTCATGTTTCCTGAGCCATTTGGAATGTTTCACTCAAATGATGTTCAGCAATGTGGAGTGGGTCCCAGTTCTGACTTCCCTGATTCAGCTATTACTCACCTGCAAATGTCTGAAGCTCCTGAGGTCACTTCTACTCCCAACACTAACGGAGCAGAAACTGCCTTGTGTGAGGATGACTTCTTGGAGTTGGATGATCTCAACGGTCCTGAATATGCTTTGCTAAACATCAATAAGCCTGTGGAGAACCTGCAGTTTGAAGATGGATTAAGTGAACTTGATCTGTACCATGATGCGCAGATGTTTCTTCATGACATGGGGCGGATTTCACATCCATATATGAACACTCTGGATAGTGCTATTGCGGATCAAAATTATGAGCTGCTTTCGAATCAAGAAAATGCAAATCATACTGGTGAACTCATGATGCATGCTCAAAGAAACATCCTGCATTCAGCAGAACACATCAATGTTTCTACATCTCTTCCTACATCAGGTGTATGTTATGAGTCTGCCAGCTTTCTTACTGAAAGCCATGGAACTCAAGATAGCACTGTGGGAGGTGTTGCTGCAAGTAAATTATCTTCTTCTCTCTGGAACTTTGTTGAGTCAATACCAACCAGTCCTGCATCGGCATCTGAAAATGCTTTGGTGAATCGGGCCTTCGAGCGATTGTCTAGCTTCAGTAGAGTGAAGAGCAGTGTCAAGGACACAAACGTTGCTGCAGGAGGGCTATCAATTTTCCTTCATCCATTGTGGTGA 1584 0.4457 MGFESDSECFSKMMASMPGFRFHPTDEELIMYYLKRKMSGRKLKLDVIRETDVYKWDPEELPAQSGLKTGDRQWFYFSPRDRKYPNAARSSRATRHGYWKATGKDRNVIYTSRTVGVKKTLVFYKGRAPNGERTDWVMHEYTLDEQELQRCQGIKDYFALYKLYRKSGPGPKNGEQYGAPFNEEEWADDDFVDCNVNSADTEVPTQQRDGVTSVDTVNVNDPVQPLLDDEIEEILKKLMDDESLHEQQNVNSHPALHLGVAEEMQNDAVNRFCREVMFPEPFGMFHSNDVQQCGVGPSSDFPDSAITHLQMSEAPEVTSTPNTNGAETALCEDDFLELDDLNGPEYALLNINKPVENLQFEDGLSELDLYHDAQMFLHDMGRISHPYMNTLDSAIADQNYELLSNQENANHTGELMMHAQRNILHSAEHINVSTSLPTSGVCYESASFLTESHGTQDSTVGGVAASKLSSSLWNFVESIPTSPASASENALVNRAFERLSSFSRVKSSVKDTNVAAGGLSIFLHPLW 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0055 527 FunFam Nac domain-containing protein 86 25 169 - -
Lele45g0055 527 Pfam No apical meristem (NAM) protein 18 143 IPR003441 GO:0003677|GO:0006355
Lele45g0055 527 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Lele45g0055 527 Gene3D NAC domain 25 168 IPR036093 GO:0003677|GO:0006355
Lele45g0055 527 SUPERFAMILY NAC domain 12 166 IPR036093 GO:0003677|GO:0006355
Lele45g0055 527 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0055 Lele-ChrLele45 630616 635303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0055 1 519 NAC Transcription Factor Family AT1G34190 43.110 6.84e-121 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele45g0055 NAM 3.5e-36 No_clan