LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele45g0041	ATGGATCCCTCCAAGCTTCCCCCTCCTCCTCCTCCCTCCAACACTAGCACTAAGCCTTCCTCTCTTCGGCTCGAGCTCGCTACCTCCCTTGAGCCCAGTCCTTTACGTAAGATCGTCGCCGTCGCCTCCATCGCCTCCGGCATTCAGTTCGGCTGGGCTCTCCAGCTTTCCCTCTTGACCCCTTACGTCGAACTCCTCGGAATCCCCCACACCTGGGCCGCCTTCATCTGGCTCTGCGGCCCCATTTCCGGCATGATTGTCCAACCCATAGTTGGATATCACAGTGACCGCTGCACTTCCCGATTCGGACGCCGACGTCCCTTCATTGCCGCCGGCGCTGCTTCCGTCGCCATCGCTGTCTTCCTCATCGGCTACGCGGCCGATATGGGCCACATGTTCGGTGACTCCTTGGAGAAGAAAACCCGGCCTCGCGCCATCGTCATATTCGTCGTCGGGTTCTGGATCCTCGACGTGGCCAACAATATGCTCCAGGGGCCTTGCCGAGCACTTCTGGCAGATCTCGCCGCCGGTGACCAACGTAAGACGCGGACTGCGAACTCGTTCTTCTCGTTCTTCATGGCAGTGGGAAACGTCCTCGGGTACGCCGCGGGGTCGTTCAGCCGCCTCCACAAGATGTTCCCGTTTACGATGACAAAAGCCTGCGACGTGTACTGCGCGAACCTGAAGAGCTGCTTCTTCCTCTCCATCGCACTTCTGGCGACTGTCTCCGCCATTGCCCTCACGTACGTGAAGGAGAAAAAGATGTCATCGTCGTCGGGTGAGAAAACAACGAAAGAATTCGGTGGTGCGGAGGTAAACGAAGAGGAATCAGAAGAAGGATCAAGATCGTCACGAGCAATGCCTTGCTTCGGGGAAATATGGGGTGCTCTGCGAGTGATGGAGAAGCCGATGTGGATCCTGCTCTTGGTGACGTGTCTCAACTGGATTGCTTGGTTCCCCTTCTTGCTGTTCGACACTGATTGGATGGGGAAGGAGGTGTATGGCGGGAAGGTGGGAGGAGAAGGGGGAGAAGGGAGGGTGTACGATATGGGGGTGCGCGCGGGGGCATTGGGCCTCATGCTCAACTCCGTGGTGCTGGGTTTCACGTCCTTGAGCATCGAGTTTCTGGCGCGTGGGGTTGGGGGCGTGAAGAGGCTCTGGGGAATTGTGAACTTCCTGCTCGCCACCTGTTTAGCGCTCACCGTGCTGATTACAAAAATCGCTGAACACTCACGTCAGTACACCGTCGGCCACAGCGGCAACTTGGAGCCTCTGCCGCCGTCCTCCGGGGTGAAAGGTGGCGCGTTGGCTCTTTTCTCGGTGCTGGGTGTACCCCTTGCGGTTACTTTCAGTATTCCTTTTGCTCTTGCATCTATATTCTCCAACAGTTCAGGGGCGGGCCAAGGGCTATCTCTGGGAGTTCTCAATCTTTCAATCGTCATTCCACAGATGGTGATTTCTGTGGCAAGTGGACCATGGGATGCTTTGTTTGGCGGCGGGAACTTGCCAGCATTTGTGGTGGGCGCGGTGGCAGCGGCTATAAGTGGCTTATTATCAATATTCTTACTGCCATCCCCACCGCCGGATATGGCCAGTACTGCGGTGGCGGCCGGAGGCTTCCATTAA	1626	0.5726	MDPSKLPPPPPPSNTSTKPSSLRLELATSLEPSPLRKIVAVASIASGIQFGWALQLSLLTPYVELLGIPHTWAAFIWLCGPISGMIVQPIVGYHSDRCTSRFGRRRPFIAAGAASVAIAVFLIGYAADMGHMFGDSLEKKTRPRAIVIFVVGFWILDVANNMLQGPCRALLADLAAGDQRKTRTANSFFSFFMAVGNVLGYAAGSFSRLHKMFPFTMTKACDVYCANLKSCFFLSIALLATVSAIALTYVKEKKMSSSSGEKTTKEFGGAEVNEEESEEGSRSSRAMPCFGEIWGALRVMEKPMWILLLVTCLNWIAWFPFLLFDTDWMGKEVYGGKVGGEGGEGRVYDMGVRAGALGLMLNSVVLGFTSLSIEFLARGVGGVKRLWGIVNFLLATCLALTVLITKIAEHSRQYTVGHSGNLEPLPPSSGVKGGALALFSVLGVPLAVTFSIPFALASIFSNSSGAGQGLSLGVLNLSIVIPQMVISVASGPWDALFGGGNLPAFVVGAVAAAISGLLSIFLLPSPPPDMASTAVAAGGFH	541

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele45g0041	541	Pfam	MFS/sugar transport protein	51	265	-	-
	Lele45g0041	541	SUPERFAMILY	MFS general substrate transporter	38	527	IPR036259	-
	Lele45g0041	541	MobiDBLite	consensus disorder prediction	267	282	-	-
	Lele45g0041	541	FunFam	Sucrose transport protein	32	523	-	-
	Lele45g0041	541	MobiDBLite	consensus disorder prediction	259	283	-	-
	Lele45g0041	541	MobiDBLite	consensus disorder prediction	1	21	-	-
	Lele45g0041	541	Gene3D	MFS general substrate transporter like domains	29	523	IPR036259	-
	Lele45g0041	541	MobiDBLite	consensus disorder prediction	1	16	-	-
	Lele45g0041	541	CDD	MFS_SLC45_SUC	38	521	-	-
	Lele45g0041	541	TIGRFAM	GPH_sucrose: sucrose/H+ symporter	34	528	IPR005989	GO:0005886\|GO:0008515\|GO:0015770
	Lele45g0041	541	PANTHER	SUGAR TRANSPORTER	34	522	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele45g0041	Lele-ChrLele45	485799	488478	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele45g0041	31	541	Sucrose Transporter Gene Family	AT1G71890	66.145	0.0	694