Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0030 ATGACAGCAACCCAGTTTTCTCTAGCTAGTTATTCGTATTCAAACGAGGAGAGACCAAGCATGGAGATGGAATCTTGTATTCCACCGGGGTTTAGATTTCGTCCTACAGAGGAAGAACTTGTGGGGTACTACCTCAAGAGGAAGATAAACTCGTTGAAAATCGATCTAGATGTTATTGCAGAGATCGATCTCTACAAAATTGAACCATGGGACATTCAAGATAAATGCAAGATGGGGTACGAGGAAGAGAAGGAGTGGTATTTCTTCAGTCACAAGGACAAGAAGTACCCGACAGGGACGAGAACAAACAGAGCGACAGCAGCAGGTTTCTGGAAAGCAACGGGGAGGGACAAGGCAGTGATGACAAAGAAGAACAGAATCATAGGTATGAGGAAGACCCTCGTCTTCTACAAGGGACGTGCCCCTTATGGCTCCAAGACCGATTGGATTATGCATGAATTTCGCCTCCAAACCTCCCAACACGCCCCTCCTCAGGAAGAAGGATGGGTGGTTTGCCGAGCATTTAAGAAACCTAGTCCTACACAGCACAGACCAAGTTTCGATTGTTGGAGTAGCCAAGCCCAGTTTTTCTGCAGGGACCAGATAAGCAATACTACAAGACCTCAATCTCTATCATTTACCAACGGAACCCTAAATCAGGTGCTTTATCCAGCTAAAGAAGGAACAAGCTTTAGCCATGCCTTCATTTCGAATCATCATCACCAACAGTTTCTGTCAAACAATGCCGTTTTGGACGACGACCACAACAGCAGCCAGCTTGTTGAGCTCATTCCACAGCTAAATAGCCCCACGGCTTCTCTATCAGCTAGAGCAGTGAAACAAAATGGCTTCACACATGAAGACAGTTACGGTGAAGAAAGGACCAATAATAATAACAACAACGTTAACGATGGCCAAGGCATTGATTGGAAGAGTTTGGACAACTTGTTCAATACACAGTTCGCAGATGATACTGCCGCTGCTGCTTATTTTTCTCATCCAAACATGCCCTTGATGCCACAAACTAGTCATGAACTACAAGTATTACAACCTCAAAATCACCAAGCTAGCCATGTTCTGGGATGCTTTCCTGATTCATAA 1101 0.4478 MTATQFSLASYSYSNEERPSMEMESCIPPGFRFRPTEEELVGYYLKRKINSLKIDLDVIAEIDLYKIEPWDIQDKCKMGYEEEKEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMTKKNRIIGMRKTLVFYKGRAPYGSKTDWIMHEFRLQTSQHAPPQEEGWVVCRAFKKPSPTQHRPSFDCWSSQAQFFCRDQISNTTRPQSLSFTNGTLNQVLYPAKEGTSFSHAFISNHHHQQFLSNNAVLDDDHNSSQLVELIPQLNSPTASLSARAVKQNGFTHEDSYGEERTNNNNNNVNDGQGIDWKSLDNLFNTQFADDTAAAAYFSHPNMPLMPQTSHELQVLQPQNHQASHVLGCFPDS 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0030 366 SUPERFAMILY NAC domain 22 177 IPR036093 GO:0003677|GO:0006355
Lele45g0030 366 FunFam Nac domain-containing protein 86 36 180 - -
Lele45g0030 366 Gene3D NAC domain 36 180 IPR036093 GO:0003677|GO:0006355
Lele45g0030 366 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 24 280 - -
Lele45g0030 366 Pfam No apical meristem (NAM) protein 28 156 IPR003441 GO:0003677|GO:0006355
Lele45g0030 366 ProSiteProfiles NAC domain profile. 27 177 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0030 Lele-ChrLele45 425873 428884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0030 23 366 NAC Transcription Factor Family AT1G71930 50.000 1.37e-106 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele45g0030 NAM 2.4e-36 No_clan