Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0025 ATGATCAGAAATGACGTCGTTTTCGAGAACAAGCCATGCACGTTGAGGTTTGAGAAGGTTCAGGGCTCTCATGGGTGGGTATGGAAGGTGTTTTGTTTTTGCATTCAGAGGTGCACAGAGACACCATGTGCAAGTGCAATGTATGGTGTTGAAAAGTCCACTTTCACACCAAGCTTTTCCGCCACCTACTATGTCTTTCTAACGATGGAAAAGAAAGAAGAGGTCAAAGGGACTCCAAAAGGTCACTTTGTGGTGTATGTGGGGATTGAAATGGAAAGATTTGTGGTTCCTATAACATACCTGAAGAATCCTATGTTTCAGAGATTGCTTGACAAAGCTGCTGATGAGTTTGGCTTTAATAATCCCAATGGGATTGTTCTGCCTTTTGATGCTTCTTCTTTCAGAACACTTATTGCTCTTTTGGACAAGTAA 432 0.419 MIRNDVVFENKPCTLRFEKVQGSHGWVWKVFCFCIQRCTETPCASAMYGVEKSTFTPSFSATYYVFLTMEKKEEVKGTPKGHFVVYVGIEMERFVVPITYLKNPMFQRLLDKAADEFGFNNPNGIVLPFDASSFRTLIALLDK 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0025 143 Pfam Auxin responsive protein 73 141 IPR003676 GO:0009733
Lele45g0025 143 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 72 137 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0025 Lele-ChrLele45 382855 384564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0025 68 142 Calmodulin-binding Proteins AT5G20810 36.000 1.27e-13 63.2