Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0020 ATGGGGAGGTCACAGAGGGATAGAGCTTCCAACGGATCTTGCAGAAGGCTACATCTCTTATTAGTGTTGAACGAAAGCTTTCTCCGCGCCAAGTTCTGGTCCCTCTCTCTTTTGCCTTCACGTTTCACGCCTGGCCATCAACTTGTCGTCTTCAATAGCCTCGCTTCCCACACTCCCATAACTCTGTTTTCCTGCAAAGGTTTCAAACAATATCTGTTTCCGCAATCTAAAGACTTGACCTTACCAAATTTGAGAAAATGGGGTTGGTTTTCTGCAGTGAAGAAAGCTATCAGTATTGCTGATTCCCAGAAAGATCAGAAAAACCATAAGTTGAACACAACATGGTCTACCGAACCCGCAGATGTGCAACCAGCTCTCTCGTCCAAAGAAGAACCAACATTTGATGTTGCTCTTCCTCTTCCATCTATTGGCACTGATCAGAAAGAGATAAGTGAAGAGATCAATGAAAAGATCAAGCATGCTTATTCGGTGGACGATGCCACTGCTGCTGTGGCAGCAGATGCACAGGATGCTACCACTGCTGATGCACATCAGGCCGCTGAAGAAGTTGTTCATCTAAAAAGTCCGCCTCATTACTTGTTGGGGAAGACAAAGGAAGAAATAGCTGCTATCAAAATTCAGACGGCATTTCGAGGGTATTTGGCAAGAAGAACATTGCATGCATTGAGAGGGTTGAAGAGGTTGAAAACATTGACACAAGAGCACTCTGTGAAACAGCAAGCAGAAGCCTCCTTACGATGCATGCAGACTCTTGCAAAGGTGCAATCTCAGATTCGCGAGAGGAGAATTAGAATGTCTGAGGAGAACCAGTCCCTTCAGCGGCAACAGCAACAGAAACACGAAAAGGAACCCAATAAGCCGCAAACCACTGTTGGAGAAGATTGGGATGATAGCAAGAAATCTAAGGAAGAAATTGAAGCAAGGCTGTTGGACAGAAAAGAAGCAGCTATGAGAAGAGAGAAAGCTCGGGCGTATTCATCCATACATCAGCAAACATGGAAGAAGCAGCAACAGCAACCTTCAAAGAGTGGAAATAGGACGTTGACGGATAGCAATAGCATGAATCCAGATTGGAGTTGGAGTTGGGGGGAGCGAAGGATGGGATCACGGCCATGGGATGAGAAGTGTGGCGGTTCAGTGGCTGATAGCGGCCATGCCCAAAAACCATGCCGCCCTCCCTCCCAACATTCTGCCGCCGTGTCGGGTGGAAAAGCAAGGCCACAGCAGCTCCATCGGAGGCATAGCAGTGCGGGATTGTCAGTAAGAGACGACGACGACGACGGGGGCAGCTCATCAGGGAAGGCCAAGTATTCAGCTGCACCTTCAAAATTATTTGGTCTCTCTCCAAACAGGACTTCTCCATCTGCTTCCAAGAGGCATTCTTGCCCCCCTCAGATTCTTTTGAATCCCCAAATGCCTTGTTCTCCTTCCCTTCACAATCAATCTCAACTTTAA 1476 0.4736 MGRSQRDRASNGSCRRLHLLLVLNESFLRAKFWSLSLLPSRFTPGHQLVVFNSLASHTPITLFSCKGFKQYLFPQSKDLTLPNLRKWGWFSAVKKAISIADSQKDQKNHKLNTTWSTEPADVQPALSSKEEPTFDVALPLPSIGTDQKEISEEINEKIKHAYSVDDATAAVAADAQDATTADAHQAAEEVVHLKSPPHYLLGKTKEEIAAIKIQTAFRGYLARRTLHALRGLKRLKTLTQEHSVKQQAEASLRCMQTLAKVQSQIRERRIRMSEENQSLQRQQQQKHEKEPNKPQTTVGEDWDDSKKSKEEIEARLLDRKEAAMRREKARAYSSIHQQTWKKQQQQPSKSGNRTLTDSNSMNPDWSWSWGERRMGSRPWDEKCGGSVADSGHAQKPCRPPSQHSAAVSGGKARPQQLHRRHSSAGLSVRDDDDDGGSSSGKAKYSAAPSKLFGLSPNRTSPSASKRHSCPPQILLNPQMPCSPSLHNQSQL 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0020 491 MobiDBLite consensus disorder prediction 333 366 - -
Lele45g0020 491 MobiDBLite consensus disorder prediction 452 471 - -
Lele45g0020 491 ProSiteProfiles IQ motif profile. 206 234 IPR000048 GO:0005515
Lele45g0020 491 Pfam IQ calmodulin-binding motif 209 226 IPR000048 GO:0005515
Lele45g0020 491 Gene3D iswi atpase 201 230 - -
Lele45g0020 491 PANTHER IQ-DOMAIN 5-RELATED 87 471 - -
Lele45g0020 491 MobiDBLite consensus disorder prediction 423 438 - -
Lele45g0020 491 MobiDBLite consensus disorder prediction 274 307 - -
Lele45g0020 491 SMART iq_5 205 227 IPR000048 GO:0005515
Lele45g0020 491 Coils Coil 262 282 - -
Lele45g0020 491 MobiDBLite consensus disorder prediction 324 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0020 Lele-ChrLele45 350301 352879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0020 85 437 IQD Protein Family AT5G03040 37.531 1.56e-62 209