Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0018 ATGGATCATTATTGCAACTCGACCATCAAGGAGAAGCATATAAATGCCTCGACTTCCATTATCGTTTTTGTTTTTGGGATCTGCGCTTCTTCCATAAACTACGTCGTTATTGTTATTCTTCTCTTCTGTTCTCTGCCTTCTGTTCACGGTCTTGGAATTAATAAATTATGGGTTTTCCTTCTCAGCTCTATTTATGTTTGCATTTATTCATTGTTTTTGGGAATCTGTGTGGCTTCTCCTCTTGGGGATCAGAAGAGAGATAGGATCACTGAGTTGCCAGGACAACCAAAGAATGTGGGTTTTCCTCAGTACTCGGGCTACGTGGCGGTGAATAAGGAATCAGGGAGGGCACTGTTTTATTTGTTGACTGAAGCACCAACGAGTCGTGGACCCAAGTCAAGGCCATTAGTGTTATGGCTTAATGGCGGTCCTGGATGCTCCTCTATTGCTTATGGAGCATCAGAAGAGATAGGACCTTTTCGTATTAGGCCTGATGGGAAGTCACTTTACTTGAATCCTTACGCTTGGAACAAATCTGAAGATGCATATACATTTCTTGTTAGTTGGTTTGAAAGATTTCCTCAGTATAGACATAGAGAATTCTACATTGCTGGAGAAAGTTATGCTGGTCACTATGTTCCTCAGTTGGCTCGGATTATTTACCAGAGAAACAAGGGTATCAAGAATCCGGTTATTAATTTTAAGGGATTTATGGTTGGAAATGCTGTTACTGATGATTACCATGATTACATTGGCACATTTGAGTACTGGTGGACTCATGGGTTGATTTCAGATTCCACTCAAAGCCTGTTGAATGAATTTCCATGGATGTCTCGAGCATACGATCCCTGCACAGAAAGGTTTGCAGACTTATACTTTAACCGTCCAGAAGTTCAGAAAGCACTGCATGCCAATACTACTGGGATTAGTTATTCATGGAAGTCGTGCAGTGACATTGTTGGGAATTATTGGGATGATTCTCCACTATCTATGCTTCCTATATATCATGAACTCATTCGTGCTGGTCTCAAGATATGGGTATACAATGGAGATACAGATGCTGTGGTTCCAGTAACTGCAACTCGATATTCTATTGATGCCTTGAAGCTGCCTACCATCATCAACTGGTATCCTTGGAATGATGATGGCAAGGTTGGAGGTTGGAGCCAAGTTTATAAAGGGCTTACGTTGGTTACGGTTACGGGAGCAGGGCACGAGATTCCACTTCCCAAACCTCGCCAGGCATTTATTCTTTTCAGGTCATTCTTGGAGAACAAGTCCATGCCTGCTTGA 1293 0.4215 MDHYCNSTIKEKHINASTSIIVFVFGICASSINYVVIVILLFCSLPSVHGLGINKLWVFLLSSIYVCIYSLFLGICVASPLGDQKRDRITELPGQPKNVGFPQYSGYVAVNKESGRALFYLLTEAPTSRGPKSRPLVLWLNGGPGCSSIAYGASEEIGPFRIRPDGKSLYLNPYAWNKSEDAYTFLVSWFERFPQYRHREFYIAGESYAGHYVPQLARIIYQRNKGIKNPVINFKGFMVGNAVTDDYHDYIGTFEYWWTHGLISDSTQSLLNEFPWMSRAYDPCTERFADLYFNRPEVQKALHANTTGISYSWKSCSDIVGNYWDDSPLSMLPIYHELIRAGLKIWVYNGDTDAVVPVTATRYSIDALKLPTIINWYPWNDDGKVGGWSQVYKGLTLVTVTGAGHEIPLPKPRQAFILFRSFLENKSMPA 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0018 430 ProSitePatterns Serine carboxypeptidases, histidine active site. 395 412 IPR033124 GO:0004185
Lele45g0018 430 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 184 IPR001563 GO:0004185|GO:0006508
Lele45g0018 430 PRINTS Carboxypeptidase C serine protease (S10) family signature 395 408 IPR001563 GO:0004185|GO:0006508
Lele45g0018 430 PRINTS Carboxypeptidase C serine protease (S10) family signature 189 214 IPR001563 GO:0004185|GO:0006508
Lele45g0018 430 ProSitePatterns Serine carboxypeptidases, serine active site. 203 210 IPR018202 GO:0004185
Lele45g0018 430 FunFam Carboxypeptidase 281 428 - -
Lele45g0018 430 Gene3D alpha/beta hydrolase 180 275 IPR029058 -
Lele45g0018 430 FunFam Carboxypeptidase 331 425 - -
Lele45g0018 430 Gene3D - 331 424 - -
Lele45g0018 430 Gene3D alpha/beta hydrolase 81 179 IPR029058 -
Lele45g0018 430 Pfam Serine carboxypeptidase 179 269 IPR001563 GO:0004185|GO:0006508
Lele45g0018 430 Pfam Serine carboxypeptidase 277 425 IPR001563 GO:0004185|GO:0006508
Lele45g0018 430 Gene3D - 284 320 - -
Lele45g0018 430 SUPERFAMILY alpha/beta-Hydrolases 84 428 IPR029058 -
Lele45g0018 430 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 89 179 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0018 Lele-ChrLele45 340815 344850 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0018 289 428 Calmodulin-binding Proteins AT2G22960 28.369 3.50e-13 66.2