Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0006 ATGTTTTCGAGACTAATACATCCTCACGAAGGGACATTTGGTCAAGAAAATATGCAGGGTGGATTGAATCACAGTCACCTTGGAGACCCATGTCTTGTCCTGACTTCTGATCCCAAACCTCGTCTTCGTTGGACTGCTGACCTTCACGAGCGATTTGTTGATGCTGTCACTCAGCTTGGAGGTGCCAGCAAAGCTACACCAAAAGCAATCATGCGGACCATGAATGTCAAGGGTTTGACTCTGTATCATTTAAAGAGTCATCTCCAGAAATACAGACTTGGCAAGCAATCAGGAAAAGATACTGGAGAGGGATGCAAAGATGGAATAGCTGCTTCGTATCTTTTAGAAAGCCCTGGTGACTCTGCTCCAAAGTTGCCAGCTTCTGATGCAAATGAAGGTCACGAAGTCAAGGAAGCATTAAGAGCTCAAATGGAAGTGCAAAGTAAACTGCACTTACTAGTCGAGGCGGAGAAGCACTTGCAGATACGCCAGGATGCAGAGGGGAAATATATGGCCATGCTTGAGAGAGCTTGCAAGATGTTAGCTGATCAATTTATTGGTGCTACAGTAATAGACACAGACAACAAAAAATTTCAAGGCATGGGAAATAAAACAACGAAGTCTTCTATGCTTGATCCCCTCAGCTTTTGCTCCTTACCATCAACTGAGGCAACTGGAGTGCACGTTCCAGAAGCACAGCCTAGTTTCCAGCAGCAGCGGGGTGACTGTTCAACTGAAAGCTGCTTGACATCACTTGAAAGCCTCGGAGGGTTGACTCTGGAAGGATCTCCTGGTGGAGCTAAAAAGAGGATGCTGAGCTTGGACTCAATGGTGGCGCCTTTGATCTGGAGTGAAGCCAATATGAGAACTCAAGGCGTTCATCTAGCCCAAGTTAATCCTCATGGAATAACTAGATCATGCTATGTGGTTAATCTCCCATGTAATACCCTATCTCTGGGCTGCTTAAGGGGATCTGGTTCCTTTCATTTGTGTAATTTAGGACCAGTTACTGAAACTTTGATCTTTGCTGTTCGAAGTGATAACAGAGGTCAGTCGAAGCTGAAAAGCAGGGACTTGGAGTGGTACTTCTTTAGTGCGCTGGACAAGAAGTACGGAAATGGGTCGAGGACGAATCGGGCCACTGAGAAAGGATACTGGAAGACTACGGGCAAGGATCGCCCAGTCCGACATAGCTCTCGTACCGTAGGAATGAAGAAGACCCTTGTTTATCATAGTGGGCGAGCTCCGCGCGGTACCCGTACCAATTGGGTCATGCACGAATACAGATTAGCTGATGAAGAATTGGCAAAAGCAGGAATGCCACAGGATGCGTTTGTGCTCTGTAGGATTTTCCAGAAGAGTGGTACTGGGCCAAAGAATGGGGAGCAGTATGGTGCCCCTTTTATAGAGGAGGAATGGGAAGATGATGATGTTGCTTTGGCTCCACTGCCCAGTGATGAGGCTGCAACTGATGAAATAATGGTCCGTGATTATGCTTTTGTTGAAACCGATGACCTTGACCAGTACCTTGATATGGGTGTGGCATCCGAAGGTGCTGGTCATGCATTAAACTTCTATCATGGGGAGTGCAGCAGTTATCCTGAGCATTCCCAAGAATGGATTGAAGATCAAAAGCCCTTGGTAGGAATTGCTGAAACTTATGAGCCTCGAGATGACCTTTTATTGAATAGGCCGGAGCAACATCCTTCAGATAGCAAACCAGTGAAAGATGGCATCAAGGCTGAAGCAAGTCGTGAAGGATATTTCTTGAATCACAATAGCTCATTTGATGAGACCTACTTGGATGCCACTGATGGATCATTCCTGGAAACCGATGATCTGGTGAATCCTGCTGAGGCAAATCCTGCTGAGACAGATGCTGCTGATACTGATGTACTAGAAGAGTATCTTACGTACTTTAATGACGGTGGTGATGATATTTCCCAGTATATCTCTTTCGATTCTCCTGAGTGGACAGGTAGTGAAAACCCTGATGTTGATGAAGGACCACCTTTAACCCAACTGAATGTTGGGGGAGAATATAAGGATATGGCAAGTAAAATTGATGCGGAAGCCCATTCTAGCGAAGAAGCTTCTTTGAAGCAGCATGTAGAGGCATCAAAATTGGGGTCAGGAAATGCATACCCATTTATGAAGAAGGACAGTCACTTGTTGGGCAGCACCCCTGCTCCCCCTGCATTTACTTCGGAGTTTCCTCCTAAAGAAATTGCTCTTCACCTTCATTCCACGGGTCAATGTTCCAATTCAGCTCATGTAACTGCAGGTATGATCAGAATAACAGACTTCACTGTGACAGGCAACAGGATGGACTGGATGCTGGGCAAAAATGGAGAGTTCAGTGTTGTAATCTCATCTTGCTTTTGGCCTGATGTTAACTCTGTTGCTTTAGTGCCTATTTCTGGTTTACTCTCTGGGAAGTCTGCATTTGTAGTGTCACACGGCTGGATTTACTTAGTCTTCTTTTCAGTGATGATTCTTTCACTGAGTTTCAAGATTGGAAGTTTCATGTATACCAGTAAATGA 2544 0.4536 MFSRLIHPHEGTFGQENMQGGLNHSHLGDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLYHLKSHLQKYRLGKQSGKDTGEGCKDGIAASYLLESPGDSAPKLPASDANEGHEVKEALRAQMEVQSKLHLLVEAEKHLQIRQDAEGKYMAMLERACKMLADQFIGATVIDTDNKKFQGMGNKTTKSSMLDPLSFCSLPSTEATGVHVPEAQPSFQQQRGDCSTESCLTSLESLGGLTLEGSPGGAKKRMLSLDSMVAPLIWSEANMRTQGVHLAQVNPHGITRSCYVVNLPCNTLSLGCLRGSGSFHLCNLGPVTETLIFAVRSDNRGQSKLKSRDLEWYFFSALDKKYGNGSRTNRATEKGYWKTTGKDRPVRHSSRTVGMKKTLVYHSGRAPRGTRTNWVMHEYRLADEELAKAGMPQDAFVLCRIFQKSGTGPKNGEQYGAPFIEEEWEDDDVALAPLPSDEAATDEIMVRDYAFVETDDLDQYLDMGVASEGAGHALNFYHGECSSYPEHSQEWIEDQKPLVGIAETYEPRDDLLLNRPEQHPSDSKPVKDGIKAEASREGYFLNHNSSFDETYLDATDGSFLETDDLVNPAEANPAETDAADTDVLEEYLTYFNDGGDDISQYISFDSPEWTGSENPDVDEGPPLTQLNVGGEYKDMASKIDAEAHSSEEASLKQHVEASKLGSGNAYPFMKKDSHLLGSTPAPPAFTSEFPPKEIALHLHSTGQCSNSAHVTAGMIRITDFTVTGNRMDWMLGKNGEFSVVISSCFWPDVNSVALVPISGLLSGKSAFVVSHGWIYLVFFSVMILSLSFKIGSFMYTSK 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0006 847 Pfam MYB-CC type transfactor, LHEQLE motif 135 180 IPR025756 -
Lele45g0006 847 Pfam No apical meristem (NAM) protein 355 430 IPR003441 GO:0003677|GO:0006355
Lele45g0006 847 FunFam Myb family transcription factor 38 96 - -
Lele45g0006 847 ProSiteProfiles NAC domain profile. 312 453 IPR003441 GO:0003677|GO:0006355
Lele45g0006 847 SUPERFAMILY NAC domain 354 453 IPR036093 GO:0003677|GO:0006355
Lele45g0006 847 Gene3D - 38 96 - -
Lele45g0006 847 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 96 IPR017930 -
Lele45g0006 847 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 14 254 IPR044848 GO:0003700
Lele45g0006 847 Pfam Myb-like DNA-binding domain 42 92 IPR001005 -
Lele45g0006 847 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 39 94 IPR006447 GO:0003677
Lele45g0006 847 SUPERFAMILY Homeodomain-like 39 95 IPR009057 -
Lele45g0006 847 Gene3D NAC domain 336 456 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0006 Lele-ChrLele45 269167 277328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0006 351 839 NAC Transcription Factor Family AT5G04410 41.199 4.51e-102 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele45g0006 NAM 1.6e-17 No_clan