Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1326 ATGATCCCAAGTGATAGAGAATCAGATCCACATATCAAAACTTCCCGACAACCCTCATTTTTTGAATTCAACCTCCTTTCCCTTCTTCCCTCTCTTCGTGGTGCATATCTCTTCCCTCTCCCAGTCTCCCACTTTCATTCACTCATGGCCTTCATCAAGCTTTTCTCTCTCTATGCTTTTGTCTTCTTCTTCTGCTACACTGTATCTTACTCTTCTTCTGCCTCCTCTGACGTTGAACTTCTCTTGGGGGAAATCAAAGCATCCTTACAAGGCAACCCCCAAAACATCATTTTGGCTTCTTGGAACTCCTCCGTGCCTCTTTGCCAATGGAGGGGTCTCAAGTGGGTCTTCTCCTACGCCTCTTCTCTCTCTTGCTTCGACTCTTCTCCTCATTGGACTAATCTCTCCCTCTTCACAGACCCTCATCTTCGTTTGCTCTCTCTTCAGTTGCCTTCTGCTAATCTCTCCGGTTCCATCCCCCGAGAGCTTTCTGAGTTCCCTATGCTCCAGAGCCTCTATCTCAACTTCAATTCGTTGAATGGAGCGATTCCTCTTGAACTTGGCTATAGTTCCTCCCTCTCCGACATTGATTTGCGTGAAAACTTTCTCGGTGGAGCTTTACCTCCATCCATCTGGAATATGTGCGATAGGCTTGTTTCTCTCAGACTCCATGGAAACTTGCTTTCTGGGTCTATTCCTGAATCAGCATTGCCAAATTGTTCTTGCGAGAATTTGCGCTTTCTTGATTTTGGAAAGAACAACTTCTCTGGGAATTTCCCAGACTTCATTACTCGTTTTGGCGGGTTGAAACAGCTTGATTTGGGTGATAATATGTTTGTGGGTTCTATTCCTCAGAGCTTAGAGAGGCTAAGGCTTGAGAAATTGAACCTTTCCCACAACAACTTTAGTGGGGTTTTGCCTACTTTTCTGGAAACCAAGTTTGGTCTGGAGGTTTTTGAAGGGAATAATCCAGAATTATGTGGGCCACCCTTGAGAAGTTGTGGTGGAAATTCTAAGTCTAGACTAAGTGCCGGTGCTATCGCTGGCATAGTTATCAGTCTGATGGCAGGGAGTGTGGTTTTAGCTTCTCTGCTTATTGGGTATGTGCAAAACAAGAGGAGGAAGAACAGGGAAGAGAGTGACGATGAATTGGAGGAAGAAGACGACGAGGAAAATGGTGATAATACTAATGGTGGTGATGGTGGTAATGGTGAGGGCAAGCTTATGTTATTTCAAGGTGGCGAGAATTTGACGTTAGACGATGTGTTGAATGCAAATGGGCAAGTTATGGAGAAGACATGCTATGGGACGGTGTATAAAGCAAAGCTTGCTGATGGAGGGACCATTGCATTGAGGTTGTTGAGAGAAGGTTGCTGCAGGGACAGTGCTTCGAGCTTGCCGCTTATAAAGCAACTGGGAAAAATTCGCCATGAGAATTTGATTCCTTTGAGAGCTTTCTATCAAGGAAAAAGAGGCGAGAAGCTCCTTATTTTTGATTATCTACCTCTCAGAACCCTGCATGATCTTCTAAATGAAACTAAAGCAGGAAAATCAGTGCTGAACTGGTCTAGGCGACACAAGATTGCATTGGGTGTAGCTAGAGGGCTTGCATATCTTCACACAGGACTCGATTCTCCAATTACTCATGGAAGTGTCAGGTCAAAGAACATTGTTGTGGACGATTTCTTTGTTGCCAGGCTCGCTGAGTCTGGGATTGATAAGCTATTGGTTCCAGCAGTAGCAGACGATATGCTGGCACTGGCAAAGTCTGAGGGCTATAAGGCTCCGGAGCTTCAAAGGATGAATAAATGTAATTCAAGAACTGATGTTTATGCATTTGGAATATTGCTGTTGGAGATTTTGATCGGAAAGAAACCAGGAAAAAGCGGGAGAGGAAGTGAGTACATGGATTTGCCTTCTATGGTGAAAGTTGCAGTTTTGGAGGAGACAACAATGGAGGTTTTTGATGTGGAGATTTTGAAAGGGATAAGAAGTCCCATGGAAGAAGGGTTGGTTCAGGCTTTGAAGCTAGCAATGGGTTGTTGTGCCCCTGTGGCTTCAGTTAGACCTACCATGGATGAAGTTGTGAGGCAGTTGGAGGAGAACAGACCAAGAAACAGGTCTGCTTTATACAGCCCTACAGAAACTAGAAGTGGAAGTGGTACCCCATTCTGA 2175 0.4478 MIPSDRESDPHIKTSRQPSFFEFNLLSLLPSLRGAYLFPLPVSHFHSLMAFIKLFSLYAFVFFFCYTVSYSSSASSDVELLLGEIKASLQGNPQNIILASWNSSVPLCQWRGLKWVFSYASSLSCFDSSPHWTNLSLFTDPHLRLLSLQLPSANLSGSIPRELSEFPMLQSLYLNFNSLNGAIPLELGYSSSLSDIDLRENFLGGALPPSIWNMCDRLVSLRLHGNLLSGSIPESALPNCSCENLRFLDFGKNNFSGNFPDFITRFGGLKQLDLGDNMFVGSIPQSLERLRLEKLNLSHNNFSGVLPTFLETKFGLEVFEGNNPELCGPPLRSCGGNSKSRLSAGAIAGIVISLMAGSVVLASLLIGYVQNKRRKNREESDDELEEEDDEENGDNTNGGDGGNGEGKLMLFQGGENLTLDDVLNANGQVMEKTCYGTVYKAKLADGGTIALRLLREGCCRDSASSLPLIKQLGKIRHENLIPLRAFYQGKRGEKLLIFDYLPLRTLHDLLNETKAGKSVLNWSRRHKIALGVARGLAYLHTGLDSPITHGSVRSKNIVVDDFFVARLAESGIDKLLVPAVADDMLALAKSEGYKAPELQRMNKCNSRTDVYAFGILLLEILIGKKPGKSGRGSEYMDLPSMVKVAVLEETTMEVFDVEILKGIRSPMEEGLVQALKLAMGCCAPVASVRPTMDEVVRQLEENRPRNRSALYSPTETRSGSGTPF 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1326 724 Gene3D Ribonuclease Inhibitor 217 336 IPR032675 -
Lele44g1326 724 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 61 703 - -
Lele44g1326 724 SUPERFAMILY Protein kinase-like (PK-like) 433 700 IPR011009 -
Lele44g1326 724 ProSiteProfiles Protein kinase domain profile. 424 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g1326 724 MobiDBLite consensus disorder prediction 705 724 - -
Lele44g1326 724 Gene3D Phosphorylase Kinase; domain 1 423 500 - -
Lele44g1326 724 SUPERFAMILY L domain-like 107 330 - -
Lele44g1326 724 Gene3D Transferase(Phosphotransferase) domain 1 502 716 - -
Lele44g1326 724 Gene3D Ribonuclease Inhibitor 78 216 IPR032675 -
Lele44g1326 724 Pfam Leucine rich repeat N-terminal domain 77 112 IPR013210 -
Lele44g1326 724 Pfam Protein tyrosine and serine/threonine kinase 429 699 IPR001245 GO:0004672|GO:0006468
Lele44g1326 724 MobiDBLite consensus disorder prediction 703 724 - -
Lele44g1326 724 MobiDBLite consensus disorder prediction 381 395 - -
Lele44g1326 724 MobiDBLite consensus disorder prediction 375 405 - -
Lele44g1326 724 FunFam Leucine-rich repeat receptor-like protein kinase 242 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1326 Lele-ChrLele44 21453373 21456501 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g1326 54 724 Receptor kinase-like Gene Family AT3G24660 69.391 0.0 879
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele44g1326 PK_Tyr_Ser-Thr 6.6e-22 CL0016